2016-12-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop'

2016-12-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge 'feature-transfer' into develop

2016-10-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge 'tisaac/plex-fix-edge-cones' into develop

2016-09-29  Toby Isaac <tisaac@uchicago.edu>

	* : plex: fix child face cone orientations  The invariant I was
	using worked for pestc numbering, not for p4est numbering.  Thanks
	to Stefano Zampini for pointing both this and the previous bug out.


2016-09-19  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into transfer

2016-09-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix test_plex2 compile with petsc enabled

2016-09-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2016-09-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'feature-comm-owned' into develop

2016-09-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'feature-conn-edge' into develop

2016-09-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : White space

2016-09-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote-tracking branch
	'michael/connectivity_split_transformations' into feature-conn-edge


2016-09-13  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : fix wrong indentation from cherry-picks

2016-08-15  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : adapt edge corner transformation analog to face corners

2016-06-29  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : create face corner permutation  created an additional
	permutation for face corners to avoid having to lookup corner
	indices where this is not necessary. Used for populating the entries
	of quad_to_half for hanging faces at tree boundaries

2016-09-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote-tracking branch 'lucas/fix-warnings' into develop

2016-09-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Favor P4EST_ENABLE_DEBUG over P4EST_DEBUG

2016-09-08  Lucas C Wilcox <lucas@swirlee.com>

	* : Remove unnecessary NULL checks on arrays  This was getting
	flagged by clang with a warning.

2016-09-08  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop'

2016-09-08  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'feature-revision' into develop

2016-09-06  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write p4est_comm_is_contained

2016-09-06  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Improve p4est_comm_is_owned and its docs

2016-09-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Document that revision counter is zero for copies

2016-09-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop-merge-petsc' into develop

2016-09-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote-tracking branch 'toby/tisaac/develop-merge-petsc'
	into develop-merge-petsc

2016-09-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'feature-revision' into develop

2016-09-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Only compile p6est with 2d and 3d enabled

2016-09-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2016-08-25  Toby Isaac <tisaac@uchicago.edu>

	* : plex: fix child edge orientation for non-custom numbering
	custom numbering and default numbering differ on the orientation of
	child edges of a face.  It worked for custom numbering before, but
	not for default numbering.  It appears to work for both now.

2016-08-17  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Make p4est_revision not collective

2016-08-17  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write p4est_revision API function  Introduce a counter that
	starts at 0 on forest creation. On every refine, coarsen, balance,
	partition call that changes the mesh, it increases by one.  It stays
	the same whin these calls are noops.  The revision counter is not
	saved to disk.  On load it is set to zero.

2016-08-17  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Catch errors in p4est_is_valid without crashing

2016-08-17  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Minor white space

2016-08-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'feature-conn-edge' into develop

2016-08-11  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	Merge branch 'develop' into feature-conn-edge

2016-08-11  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : correct typos

2016-08-08  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update home page index.html

2016-08-08  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop-merge-petsc' into develop

2016-08-08  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into develop-merge-petsc

2016-08-08  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update copyright notice and some white space

2016-08-08  Toby Isaac <tisaac@uchicago.edu>

	Merge branch 'tisaac/plex-wo-fortran-change' into
	tisaac/develop-merge-petsc  * tisaac/plex-wo-fortran-change:   plex:
	compute child coordinates   plex: indent   plex: fix child offsets
	when calculating leaves   plex: type fix   plex: some fixes to
	shared children changes in 3d   plex: some fixes to shared children
	changes   test_plex: refactor and add some small tests good for
	debugging   plex: create sf leaves for children now   plex: don't
	compress out floating faces   plex: fix bound when computing PetscSF
	p4est_get_plex_data_ext: use data if given   plex: allow for custom
	numbering   plex: correct plex_to_local calculation for PetscSF()
	plex: fix numbering for making PetscSF   plex: correct overlap logic


2016-08-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2016-08-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Revert "Bugfix in p4est_wrap" which was no bugfix  This reverts
	commit e3bd5afadfd57c0b4e030a04dd550be200226e62.

2016-08-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Bugfix in p4est_wrap

2016-07-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'feature-subcomm' into develop

2016-07-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'feature-conn-twotrees' into develop

2016-07-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into feature-conn-twotrees

2016-07-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'feature-conn-edge' into develop

2016-07-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into feature-conn-edge

2016-07-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2016-07-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Align conn_twotrees code to our standards

2016-07-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Final optimizations on p4est_transfer

2016-07-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Tighten API down to bare minimum

2016-07-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Remove unnecessary context data

2016-07-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Activate 3D version of p4est_transfer_custom

2016-07-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Implement p4est_transfer_custom in 2D

2016-07-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Tighten code of p4est_transfer_fixed

2016-07-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Simplify communicator handling in p4est_transfer

2016-07-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Edit API of p4est_transfer_custom

2016-07-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add fixed size transfer to partition test

2016-07-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Extend fixed size transfer to 3D

2016-07-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Implement p4est_transfer_fixed

2016-07-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Work on API for variable-size data transfer

2016-07-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Begin work on partition data transfer

2016-07-04  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	Merge branch 'develop' into feature-conn-twotrees

2016-07-04  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : adapt data-types in test

2016-07-04  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : correct p4est_connectivity_new_twotrees  datatypes and
	indentation

2016-07-04  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : correct data-types in function-header

2016-07-04  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : minimizing diffs

2016-07-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2016-07-01  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : fix indentation of p4est_connectivity

2016-06-30  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : cleanup of source

2016-06-23  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : fix for tree_to_face

2016-06-23  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : fix test

2016-06-22  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : code was positioned in a bad spot

2016-06-22  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : manual cherrypick

2016-06-21  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : fix documentation, make 2 trees available in p8est

2016-06-21  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : fixed indentation issue

2016-06-21  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : fixed twotrees orientation issue

2016-06-21  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : minor fixes

2016-06-21  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : implemented 2 cubes and some fixes  TODO test

2016-06-21  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : forgot indentation tag

2016-06-21  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : define generic tree positions and rotations  rotations for right
	tree only

2016-06-21  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : begun implementing connectivity for 2 arbitrarily rotated trees


2016-06-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Edit inline docs to p4est_connectivity

2016-06-28  Toby Isaac <tisaac@uchicago.edu>

	* : plex: compute child coordinates

2016-06-28  Toby Isaac <tisaac@uchicago.edu>

	* : plex: indent

2016-06-23  Toby Isaac <tisaac@uchicago.edu>

	* : plex: fix child offsets when calculating leaves

2016-06-23  Toby Isaac <tisaac@uchicago.edu>

	* : plex: type fix

2016-06-23  Toby Isaac <tisaac@uchicago.edu>

	* : plex: some fixes to shared children changes in 3d

2016-06-23  Toby Isaac <tisaac@uchicago.edu>

	* : plex: some fixes to shared children changes

2016-06-23  Toby Isaac <tisaac@uchicago.edu>

	* : test_plex: refactor and add some small tests good for debugging


2016-06-23  Toby Isaac <tisaac@uchicago.edu>

	* : plex: create sf leaves for children now

2016-06-22  Toby Isaac <tisaac@uchicago.edu>

	* : plex: don't compress out floating faces  WIP: connect children
	WIP

2016-06-23  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : fix for transformation

2016-06-21  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : bugfix

2016-06-21  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : forgot removing face_edge_permutation_refs

2016-06-21  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : clarified documentation

2016-06-21  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : Orientation bugfix for face edge transformation  Orientation was
	not calculated w.r.t. lower edge as it is defined but w.r.t. a
	specific edge.

2016-06-20  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	Merge branch 'feature-conn-edge' of
	https://bitbucket.org/lahnerml/p4est into feature-conn-edge

2016-06-20  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : improve documentation  Be more specific about the entries stored
	in p4est/p8est_connectivity.

2016-06-20  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : improve documentation  Be more specific about the entries stored
	in p4est/p8est_connectivity.

2016-06-16  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : Doc typo in p8est_connectivity.h

2016-06-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into subcomm

2016-06-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Use sc_MPI as prefix to fix --disable-mpi

2016-06-10  Toby Isaac <tisaac@uchicago.edu>

	* : p6est: reduce use of comm duplication

2016-05-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Edit two commments

2016-05-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into feature-conn-edge

2016-05-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update AUTHORS file

2016-05-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote-tracking branch 'michael/license' into develop

2016-05-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add Free BSD license for independent contributors

2016-05-30  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : implemented corner_edge_corner

2016-05-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'feature-wrap-new-p4est' into develop

2016-05-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'fix-memalign' into develop

2016-05-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc including memalign code

2016-05-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write p4est_wrap_new_p4est

2016-05-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Doc typos in p8est_wrap.h

2016-05-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2016-05-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into subcomm

2016-05-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Run indent in src and test directories

2016-05-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Run indent in src and test directories

2016-05-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Clean and fix p6est header formalities

2016-05-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add missing include directive

2016-05-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into subcomm

2016-05-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Udpate to lastest libsc develop branch

2016-05-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix test Makefile.am

2016-05-19  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : assertions  added assertions for orientation, corrected
	assertions for edge corners

2016-04-06  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : fixed broken indent in connectivity header

2016-03-14  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : added permutation for edge corners  added a permutation to
	exclude edge neighbors when searching for corner neighbors.  TODO:
	Implement this in corner lookup table

2016-05-13  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : manual cherry-pick

2016-01-07  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : fixes for transformation of face edges

2016-05-13  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : begun implementing encoding edges across trees

2015-12-08  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : implemented permutation of face edges  implemented permutation
	of face edges as described in mesh document in p4est_mesh repo

2016-01-07  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : corrected typo

2016-05-05  Johann Rudi <johann@ices.utexas.edu>

	* : Unify interface to MPI communicator reduction functions for
	p4est and p6est.

2016-05-04  Johann Rudi <johann@ices.utexas.edu>

	Merge branch 'subcomm' into develop  Conflicts:
	example/timings/timings2.c 	src/p4est.c 	src/p4est.h
	src/p4est_communication.c 	src/p4est_extended.h 	src/p4est_io.c
	src/p4est_lnodes.c 	src/p4est_points.c 	src/p4est_to_p8est.h
	src/p8est.h 	src/p8est_extended.h 	src/p8est_lnodes.h
	test/Makefile.am  Conflicts due to prematurely (possibly)
	cherry-picking commits   e5707189b130a8d3c78edf321f179d93a1493cbb
	68b6b6ab684cf0f55ae3fdf060bb5be37a9c8ed3
	06940d05aba495ac182977d1bac2bcedfdf23dc4 instead of merging
	appropriate 'subcomm' branch.  This is not fun.

2016-05-02  Michael Lahnert <michael.lahnert@ipvs.uni-stuttgart.de>

	* : added license text

2016-03-10  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix warning in VTK code

2016-03-10  Toby Isaac <tisaac@uchicago.edu>

	* : plex: fix bound when computing PetscSF

2016-03-09  Toby Isaac <tisaac@uchicago.edu>

	* : p4est_get_plex_data_ext: use data if given

2016-03-03  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update the memory alignment in libsc

2016-03-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'master' into develop

2016-03-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge pull request #9 from lcw/fix-inp-tree-num  Respect the
	element number in the inp file

2016-03-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge pull request #13 from lcw/gloidx-abs  Define an abs macro
	for gloidx

2016-03-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge pull request #10 from bangerth/fix-typo  Fix a typo.

2016-03-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'bcasthead' into develop

2016-03-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'fix-abs' into develop

2016-03-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Use another ABS macro

2016-03-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Indent test_valid2

2016-02-23  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add abs macro to test_valid

2016-02-23  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add more ABS macros

2016-02-23  Lucas C Wilcox <lucas@swirlee.com>

	* : Define an abs macro for gloidx

2016-02-23  Lucas C Wilcox <lucas@swirlee.com>

	* : Define an abs macro for gloidx

2016-02-22  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Indent new test

2016-02-22  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Implement broadcasthead in p4est_load

2016-02-22  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write a p4est load test

2016-02-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'juqueen' into develop

2016-02-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into juqueen

2016-02-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Remove NaN construct and reenable examples

2016-02-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Warning fixes in lnodes, iterate, libsc headers

2016-02-11  Toby Isaac <tisaac@uchicago.edu>

	* : plex: allow for custom numbering  Internally in DMP4est, a
	different, p4est-specific reference tree may be used, and this
	requires different child id numbering.

2016-02-04  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'fix-complete-subtree' into develop

2016-02-04  Toby Isaac <tisaac@uchicago.edu>

	* : bug update

2016-02-04  Toby Isaac <tisaac@uchicago.edu>

	* : update doc for completing and balancing

2016-02-04  Toby Isaac <tisaac@uchicago.edu>

	* : p4est_complete_or_balance(): recalculate maxlevel

2016-02-04  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update path from git submodule

2016-02-04  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Modify test_complete_subtree

2016-02-03  Toby Isaac <tisaac@uchicago.edu>

	* : plex: correct plex_to_local calculation for PetscSF()

2016-02-03  Toby Isaac <tisaac@uchicago.edu>

	* : test_complete_subtree: only correct count once

2016-02-03  Toby Isaac <tisaac@uchicago.edu>

	* : complere_or_balance: bug fixes  - memmove wasn't moving the
	right amount - bound == 1 (just completion) doesn't need the hash
	table operations

2016-02-03  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix bad memory access

2016-02-03  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add bug report

2016-02-03  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Unnecessary variable

2016-01-31  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Possible correction for complete_or_balance

2016-02-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Start reproducing issue with complete_subtree

2016-02-03  Toby Isaac <tisaac@uchicago.edu>

	* : plex: fix numbering for making PetscSF  "local" numbering is in
	ascending global order, which is different than lnodes native
	numbering, so we need one more indirection to put the value in the
	right place.

2016-02-01  Toby Isaac <tisaac@uchicago.edu>

	* : plex: correct overlap logic

2016-01-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'tisaac/petsc' into develop  Conflicts:
	example/timings/timings2.c 	src/p4est_extended.h
	src/p4est_to_p8est.h 	src/p8est_extended.h

2016-01-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'wrap' into develop

2016-01-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2016-01-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update to latest libsc develop branch

2016-01-25  Toby Isaac <tisaac@uchicago.edu>

	* : plex: fix bad orientation test

2016-01-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2016-01-24  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Rearrange

2015-12-03  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Indent

2015-12-03  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Make sure to use sc_ prefix for anything MPI

2015-11-23  Toby Isaac <tisaac@uchicago.edu>

	* : plex: added p4est_get_plex_data_ext(), which returns the ghost
	and lnodes

2015-11-23  Toby Isaac <tisaac@uchicago.edu>

	* : plex bug fix: first_local_quad not set

2015-11-19  Toby Isaac <tisaac@uchicago.edu>

	* : libsc update

2015-11-16  Toby Isaac <tisaac@uchicago.edu>

	* : test_plex: set the pointsf

2015-11-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Comment in src/Makefile.am

2015-11-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into mangll

2015-11-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2015-11-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Two p6est fixes

2015-11-03  Toby Isaac <tisaac@uchicago.edu>

	* : move p6est into main build

2015-11-03  Toby Isaac <tisaac@uchicago.edu>

	* : delete empty files

2015-11-03  Toby Isaac <tisaac@uchicago.edu>

	Merge remote-tracking branch 'carsten/vtk' into develop  *
	carsten/vtk: (32 commits)   Simplify handling of VTK float type
	Update VTK api   Always expect Ncorners many double variables
	Proceed toward unified VTK input convention   Call it continuous
	inside vtk_write_file   Respect the VTK parameter continuous,
	default 0   Do not require vertices with geometry   Deep copy
	filename into VTK context   Indent two examples   Require
	vtk_context_new for vtk_write_header   Move p8est_vtk_write_file up
	in .h file   Prepare p4est_vtk_context_new and friends   Add
	comments to geometry   Indent on p4est_vtk   Fix warnings on signed
	comparison   Fix dereference of return value of sc_array_index
	Some changes to VTK interface and documentation   Tweak doxygen
	setup   Update documentation   Correct typos   ...

2015-11-03  Toby Isaac <tisaac@uchicago.edu>

	Merge remote-tracking branch 'carsten/wrap' into develop  *
	carsten/wrap: (29 commits)   Return unchanged quadrant window in
	wrap_partition   Break some long lines   Update configure logic for
	petsc   update petsc configure: new directory to check
	p4est_petsc.m4: new place to look for PETSc logic   Write
	p4est_wrap_new_copy   Update libsc   Prepare sharing of connectivity
	in wrap   Adapt test to traverse change   Change traverse interface
	for consistency   Add p4est_wrap_set_coarsen_delay   Update libsc
	for option spacing   Extend search to allow for NULL points array
	Update documentation on search   Isolate p4est_comm_is_empty   Cut
	back on stack usage in p4est_search   Finalize parameters for
	p4est_traverse   Finish recursion in p4est_traverse   Work on
	p4est_traverse recursion   Add p4est_quadrant_child   ...

2015-11-03  Toby Isaac <tisaac@uchicago.edu>

	* : libsc update

2015-11-03  Toby Isaac <tisaac@uchicago.edu>

	Merge remote-tracking branch 'carsten/develop' into develop  *
	carsten/develop:   Funding update in README   Add script to compute
	SFC properties   Add grant number to disclaimer   Update libsc
	Update libsc   Update libsc   Update libsc   Add assertion   remove
	a warning   Update Doxyfile   Remove warnings   Add Daniel's
	peroidic example: it fails until we fix edge and corner transforms

2015-10-06  Toby Isaac <tisaac@ices.utexas.edu>

	* : config: don't declare a version "dirty" because of untracked
	files in sc

2015-10-05  Toby Isaac <tisaac@ices.utexas.edu>

	* : switch to Toby's libsc in .gitmodules  This branch will be used
	during development of the p4est/PETSc interface.  Once development
	is stable and changes have merged back upstream, this will be
	changed back to the default location

2015-10-05  Toby Isaac <tisaac@ices.utexas.edu>

	* : sc module update: Let user define sc_abort  PETSc can use this
	with longjmp to bring libsc stack calls within PETSc's error
	handling system.

2015-09-17  Johann Rudi <johann@ices.utexas.edu>

	* : test_subcomm: Add one more test.

2015-09-17  Johann Rudi <johann@ices.utexas.edu>

	* : p[48]est_communication: Add comments.

2015-09-17  Johann Rudi <johann@ices.utexas.edu>

	* : Add test for reducing MPI communicators.

2015-09-17  Johann Rudi <johann@ices.utexas.edu>

	* : p4est_communication: Add print statements. Minor changes.

2015-09-17  Johann Rudi <johann@ices.utexas.edu>

	* : p4est_communication: MPI communicator reduction to non-empty
	processes does not require communicating partition information.

2015-09-17  Johann Rudi <johann@ices.utexas.edu>

	* : p4est_communication: Add sc_ prefix to MPI functions, constants,
	etc.

2015-09-17  Johann Rudi <johann@ices.utexas.edu>

	* : Update libsc submodule.

2015-09-16  Johann Rudi <johann@ices.utexas.edu>

	* : Move functions for reduction of MPI communicator to
	p4est_communication.*

2015-09-15  Johann Rudi <johann@ices.utexas.edu>

	* : By default, the MPI communicator is not duplicated when creating
	a new p4est object.  Conflicts: 	src/p4est.c
	src/p4est_communication.c 	src/p4est_extended.h
	src/p4est_to_p8est.h 	src/p8est_extended.h

2015-04-06  Johann Rudi <johann@ices.utexas.edu>

	* : p4est: Add missing MPI check.

2015-02-13  Johann Rudi <johann@ices.utexas.edu>

	* : Fix reduced MPI communicator bugs.  Conflicts: 	src/p4est.c
	src/p4est.h 	src/p4est_algorithms.c 	src/p4est_io.c
	src/p4est_points.c 	src/p8est.h

2015-02-12  Johann Rudi <johann@ices.utexas.edu>

	* : Add function to reduce MPI communicator to processors that are
	not empty.  Conflicts: 	src/p4est.h 	src/p8est.h

2014-10-07  Johann Rudi <johann@ices.utexas.edu>

	* : p4est_lnodes: Fix variable re-declaration.

2014-10-07  Johann Rudi <johann@ices.utexas.edu>

	* : p4est_ghost: Fix variable re-declaration.

2014-10-07  Johann Rudi <johann@ices.utexas.edu>

	* : p4est_algorithms: Put storage class first.

2014-10-07  Johann Rudi <johann@ices.utexas.edu>

	* : p4est_lnodes: Fix unused variable, print statements.  Conflicts:
	src/p4est_lnodes.c

2014-10-07  Johann Rudi <johann@ices.utexas.edu>

	* : p4est_ghost: Fix variable redeclaration, variable casting for
	print.

2015-09-14  Johann Rudi <johann@ices.utexas.edu>

	* : p4est_lnodes: Include statistics only if debug is enabled.

2015-09-14  Johann Rudi <johann@ices.utexas.edu>

	* : p[48]est_extended: Add comments.

2014-03-10  Toby Isaac <tisaac@ices.utexas.edu>

	* : add partition_lnodes. timing partition_lnodes  Conflicts:
	example/timings/timings2.c 	src/p4est_extended.h 	src/p4est_lnodes.c
	src/p4est_lnodes.h 	src/p4est_to_p8est.h 	src/p8est_extended.h

2015-07-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Disable two programs for juqueen

2015-07-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Return unchanged quadrant window in wrap_partition

2015-07-26  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Funding update in README

2015-07-26  Toby Isaac <tisaac@ices.utexas.edu>

	* : Add script to compute SFC properties

2015-07-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'petsc' into wrap

2015-07-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into petsc

2015-07-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Break some long lines

2015-07-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote-tracking branch 'toby/petsc' into petsc

2015-07-08  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add grant number to disclaimer

2015-07-07  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'petsc' into wrap

2015-07-07  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update configure logic for petsc

2015-07-02  Toby Isaac <tisaac@ices.utexas.edu>

	* : update petsc configure: new directory to check

2015-01-28  Toby Isaac <tisaac@ices.utexas.edu>

	* : p4est_petsc.m4: new place to look for PETSc logic

2015-07-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Simplify handling of VTK float type

2015-07-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update VTK api

2015-07-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Always expect Ncorners many double variables

2015-07-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Proceed toward unified VTK input convention

2015-06-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Call it continuous inside vtk_write_file

2015-06-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Respect the VTK parameter continuous, default 0

2015-06-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Do not require vertices with geometry

2015-06-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Deep copy filename into VTK context

2015-06-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Indent two examples

2015-06-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Require vtk_context_new for vtk_write_header

2015-06-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Move p8est_vtk_write_file up in .h file

2015-06-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Prepare p4est_vtk_context_new and friends

2015-06-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add comments to geometry

2015-06-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Indent on p4est_vtk

2015-06-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix warnings on signed comparison

2015-06-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into vtk

2015-06-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into wrap

2015-06-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2015-05-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write p4est_wrap_new_copy

2015-05-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2015-05-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Prepare sharing of connectivity in wrap

2015-05-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Adapt test to traverse change

2015-05-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote-tracking branch 'fifthwheel' into wrap  This is
	done to fix a bad dependency in a third-party package.

2015-05-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into wrap

2015-05-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Change traverse interface for consistency

2015-05-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2015-05-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into wrap

2015-05-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2015-05-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into wrap

2015-05-21  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2015-05-21  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add assertion

2015-05-21  Johannes Holke <s6joholk@uni-bonn.de>

	* : remove a warning

2015-03-31  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update Doxyfile

2015-05-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Remove warnings

2015-05-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote-tracking branch 'toby/fix-edge-transform'

2015-04-28  Toby Isaac <tisaac@ices.utexas.edu>

	* : Add Daniel's peroidic example: it fails until we fix edge and
	corner transforms  Computing transforms was complex and error prone.
	Now we directly build a list of all the copies we wish to omit and
	compare against it.  The "weird" example in p8est_test_periodic was
	wrong: the weird edge and weird face needed to include all of the
	copies that self identify, including the same edge with multiple
	orientations.  We have to allow multiple orientations of the same
	edge in p8est_connectivity_is_valid()

2015-04-26  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: fix comm duplication in p6est_copy()

2015-04-26  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: handle repartition with empty processors

2015-03-20  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Fix dereference of return value of sc_array_index

2015-03-05  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est_reduce_comm.  TODO: split this into p4est/p6est changes

2015-03-05  Toby Isaac <tisaac@ices.utexas.edu>

	* : added additional p6est partition functions needed for gmg  Will
	add doc when the rush is over

2015-03-04  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Some changes to VTK interface and documentation

2015-03-04  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Tweak doxygen setup

2015-03-02  Toby Isaac <tisaac@ices.utexas.edu>

	* : libsc update

2015-02-27  Toby Isaac <tisaac@ices.utexas.edu>

	* : small type fixes

2015-02-24  Toby Isaac <tisaac@ices.utexas.edu>

	Merge remote-tracking branch 'origin/develop' into develop

2015-02-24  Toby Isaac <tisaac@ices.utexas.edu>

	* : git submodule update

2015-02-24  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'tisaac/johann/next' into develop

2015-02-24  Toby Isaac <tisaac@ices.utexas.edu>

	* : rename p4est_partition_lnodes_ext to
	p4est_partition_lnodes_detailed  _ext functions are only for when we
	need to preserve backward compatibility.

2015-02-21  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add p4est_wrap_set_coarsen_delay

2015-02-17  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc for option spacing

2015-02-13  Johann Rudi <johann@ices.utexas.edu>

	* : Fix reduced MPI communicator bugs.

2015-02-12  Johann Rudi <johann@ices.utexas.edu>

	* : p8est_extended: Minor change.

2015-02-12  Johann Rudi <johann@ices.utexas.edu>

	* : Add function to reduce MPI communicator to processors that are
	not empty.

2015-02-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Extend search to allow for NULL points array

2015-02-03  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: further initialization for _from_p4est()

2015-02-03  Ethan Alan Hereth <e.a.hereth@gmail.com>

	Merge branch 'develop' into vtk_cell_data

2015-02-03  Ethan Alan Hereth <e.a.hereth@gmail.com>

	Merge branch 'develop' of https://github.com/cburstedde/p4est
	into develop

2015-02-02  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: initialize root_len in _from_p4est()

2015-02-01  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Update documentation  This commit updates the Doxygen
	documentation; it explains how p?est_vtk_write_{cell,point}_data now
	requires that the current p?est_vtk_context structure be provided as
	the final of the variable arguments. This is used to validate that
	the correct number of variable arguments have been provided.

2015-02-01  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Correct typos

2015-02-01  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Add final, marker argument to var arg functions  This commit
	fulfills a TODO requiring that the p4est_vtk_context structure be
	passed at the end of the variable argument list of the
	p4est_vtk_write_{cell,point}_data functions.

2015-02-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update documentation on search

2015-01-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into wrap

2015-01-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Try another way to squish warnings

2015-01-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2015-01-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into wrap

2015-01-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2015-01-28  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Replace assertions with true checks  This commit replaces a
	number of assertions in the p{4,8}est_vtk.c files with
	SC_CHECK_ABORT macros containing descriptive messages to help users
	understand why the code fails. Some documentation has been updated
	to aid in understanding why the code might have failed.

2015-01-28  Toby Isaac <tisaac@ices.utexas.edu>

	* : p4est_petsc.m4: new place to look for PETSc logic

2015-01-26  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add thanks to Wolfgang

2015-01-26  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote-tracking branch 'wolfgang/fix-typo' into develop

2015-01-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'traverse' into wrap

2015-01-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Isolate p4est_comm_is_empty

2015-01-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Cut back on stack usage in p4est_search

2015-01-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Finalize parameters for p4est_traverse

2015-01-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Finish recursion in p4est_traverse

2015-01-24  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Work on p4est_traverse recursion

2015-01-24  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add p4est_quadrant_child

2015-01-21  Wolfgang Bangerth <bangerth@math.tamu.edu>

	* : Fix a typo.

2015-01-19  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Start work on p4est_traverse

2015-01-18  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Eliminate compiler warning

2015-01-18  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Re-order p4est_vtk.h file, move *_datav functions  All cell
	related vtk functions are declared before the point related
	functions in p4est_vtk.h. The p4est_vtk_write_{cell,point}_datav
	functions are moved to p4est_vtk.c as they are only used internally.


2015-01-18  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Eliminate p4est_vtk_write_all function  This commit removes the
	p4est_vtk_write_all function and modifies p4est_vtk_write_file
	accordingly. All code in example/steps/ is updated as well.

2015-01-17  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into wrap

2015-01-17  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2015-01-17  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Hide the p4est_vtk_context_t structure  This commit moves the
	definition of the p4est_vtk_context_t structure from the p4est_vtk.h
	file to the p4est_vtk.c file.

2015-01-16  Toby Isaac <tisaac@ices.utexas.edu>

	* : move connrefine declaration to connectivity.h

2015-01-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'connrefine' into develop

2015-01-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Make it compile non-mpi

2015-01-14  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est_lnodes_get_column_labels(): fix memset size

2015-01-13  Toby Isaac <tisaac@ices.utexas.edu>

	* : off by one

2015-01-13  Toby Isaac <tisaac@ices.utexas.edu>

	* : added p6est_lnodes_get_column_labels()

2015-01-12  Toby Isaac <tisaac@ices.utexas.edu>

	* : submodule update

2015-01-12  Toby Isaac <tisaac@ices.utexas.edu>

	* : start p6est_lnodes_get_column_labels()

2015-01-08  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'hotfix-p6est-zlib' into feature-connrefine

2015-01-07  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: protect against build without zlib

2015-01-06  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into wrap

2015-01-06  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update p4est howto

2015-01-06  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add return type to some sc_list calls

2014-12-31  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Document p{4,8}est_vtk_write_{cell,point}_datav  This commit
	simply adds Doxygen documentation for both of the datav functions.
	NOTE: if p4est_vtk_write_all is to be eliminated, I am not sure
	these functions will be needed.

2014-12-31  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Replace double arrays with sc_arrays in vtk export  This commit
	replaces the double arrays of custom data in
	p{4,8}est_vtk_write_{cell,point}_data with sc_arrays. This is done
	to facilitate validation of the input data, i.e. to assure that the
	proper number of scalar/vector data has been provided. By extension,
	this commit modifies the behavior of
	p{4,8}est_vtk_write_{cell,point}_datav and the arguments of
	p{4,8}est_vtk_write_{cell,point}_{scalar,vector}.  The documentation
	has been updated and cleaned up.

2014-12-31  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Document p4est_vtk_context_t struct, add a member  This commit
	adds Doxygen documentation for the p4est_vtk_context_t structure and
	adds the new member num_nodes which will hold the number of nodes in
	the p4est vtk output. This will be used to assure the proper number
	of point scalars/vectors are provided by the user.

2014-12-28  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Initial implementation of the new vtk context  This commit
	implements the proposed p4est_vtk_context_t structure and modifies
	all the vtk IO to use it. Most of the documentation is updated.
	Currently, p4est_vtk_write_header returns an allocated
	p4est_vtk_context_t pointer which must be passed to subsequent
	p4est_vtk_* calls and is destroyed by p4est_vtk_write_footer.  The
	convenience function, p4est_vtk_context_destroy, is added to perform
	all required file closing and free the context.  Also, the
	p4est_vtk_write_cell_datav function is implemented in this commit.

2014-12-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add comments and assertion to search

2014-12-24  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Minor bug fix during pvtu file export

2014-12-21  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix some warnings from --pedantic

2014-12-21  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Simplify and clarify search

2014-12-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Clarify and assert num_ett, num_ctt

2014-12-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Propose VTK API changes

2014-12-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge 'fix-inp-tree-num' into develop

2014-12-11  Toby Isaac <tisaac@ices.utexas.edu>

	* : connrefine: passes simple eye tests.

2014-12-10  Toby Isaac <tisaac@ices.utexas.edu>

	* : connrefine: added p4est_connectivity_refine  This is a bit of a
	hack: create lnodes redundantly, convert those nodes to vertices,
	call p4est_connectivity_complete().  There is some overlap with
	p4est_connectivity_new_brick(), but this can be used, e.g., on the
	cubed sphere.

2014-12-10  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: fixed balancing with non-power-of-2 root length.  We just
	have to shift the stack by the difference and it works out fine.

2014-12-10  Lucas C Wilcox <lucas@swirlee.com>

	* : Respect the element number in the inp file

2014-12-10  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: added root_len member  We need this to keep track of the
	root length when, e.g., coarsening.

2014-12-10  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: starting to add feature for non-power-of-2 vertical
	layers  This should be simpler than it would be for p4est: there
	isn't really a modification of the SFC, we just have to be careful
	about loops with an implicit root length of P6EST_ROOT_LEN

2014-12-08  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'vtk' into wrap

2014-12-06  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Move p4est comm tags into p4est_base.h

2014-11-26  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Pull in sc_lapack/dmatrix addition

2014-11-24  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix text on binary packages

2014-11-24  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2014-11-24  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add thanks for homebrew package

2014-11-23  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Tweak mainpage.dox

2014-11-19  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix webpage source references

2014-11-19  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Mention binary packages on the homepage

2014-11-19  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add P4EST_COMM_TAG_FIRST and _LAST

2014-11-19  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add overlapping ghost exchange to test_ghost

2014-11-19  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Always assign ghost_data in ghost_exchange_begin

2014-11-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix warning

2014-11-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Asynchronous ghost_exchange_custom_levels

2014-11-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Prepare asynchronous ghost_exchange_custom_levels

2014-11-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Asynchronous ghost data and custom exchange

2014-11-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : White space

2014-11-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : A couple tweaks to the vtk API

2014-11-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into vtk

2014-11-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'wrap' into develop

2014-11-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update README

2014-11-03  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add announcement for v1.1

2014-11-03  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update web page

2014-10-31  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix LEAF_IS_FIRST_IN_TREE

2014-10-31  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix warnings

2014-10-31  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add to wrap documentation

2014-10-31  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge 'alex/wrap' into wrap

2014-10-31  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add LEAF_IS_FIRST_IN_TREE to wrap

2014-10-30  Alex Fikl <alexfikl@gmail.com>

	* : moved p4est_wrap_new_ext to p4est_wrap.h so we can avoid the
	circular dependancy caused by having a p4est_replace_t member in
	p4est_wrap_t

2014-10-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into wrap

2014-10-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2014-10-28  Alex Fikl <alexfikl@gmail.com>

	* : Add two new arguments to p4est_wrap_ext.  Added a
	p4est_replace_t and a user_pointer argument to the constructor. The
	replace function has also been added to p4est_wrap_t and called in
	p4est_wrap_adapt during refining, coarsening and balancing.

2014-10-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Rework wrap iterator to track mirrors

2014-10-24  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Improve error reporting  This commit generalizes the error
	reporting in p4est_vtk_write_footer to be correct for both a p4est
	or a p8est.

2014-10-24  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Update the vtk documentation  This commit updates the
	p{4,8}est_vtk.h files with appropriate documentation explaining the
	new custom cell data export functionality.

2014-10-24  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Completely re-factor custom cell data vtu export  This commit
	totally reworks the custom cell data export introduced previously.
	The functionality is largely the same but the code is much cleaner.
	Following is a summary of the changes:  * p{4,8}est_vtk_write_file
	and p{4,8}est_vtk_write_all have been   reverted back to their
	previous functionality for backwards   compatibility.  I.e. these
	functions do not support custom cell data.  *
	p{4,8}est_vtk_write_header now ONLY writes point and cell data and
	appropriate header text; all logic related to custom point/cell data
	export has been removed and is now self contained.  * Two
	(technically three) new functions have been introduced:
	p{4,8}est_vtk_write_cell_data and p{4,8}est_vtk_write_point_data.
	p{4,8}est_vtk_write_point_data is really just a wrapper to the
	function vp{4,8}est_vtk_write_point_data which facilitates passing
	variable argument lists from a calling function to the called
	function. These functions take a variable number of custom
	point/cell   data and pass them one set at a time to the
	p{4,8}est_vtk_write_{point,cell}_{scalar,vector} functions that
	write   them to the vtu file.  * No meta data is written to the
	.pvtu file in any of the
	p{4,8}est_vtk_write_{point,cell}_{scalar,vector} functions. The meta
	data associated with the custom point/cell data is now all written
	by   p{4,8}est_vtk_write_{point,cell}_data.  *
	p{4,8}est_vtk_write_footer is largely unchanged except that the
	footer   data associated with the custom point data has been moved
	into   p{4,8}est_vtk_write_point_data.

2014-10-24  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Change hollow status in wrap

2014-10-24  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Activate btype argument in p4est_wrap_new_ext

2014-10-24  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Prepare p4est_wrap_new_ext constructor

2014-10-24  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into wrap

2014-10-24  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Unnecessary call in quadrant_is_inside_tree

2014-10-24  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2014-10-24  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Small edit on README

2014-10-23  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Extend mesh example

2014-10-22  Ethan Alan Hereth <e.a.hereth@gmail.com>

	Merge branch 'develop' into vtk_cell_data

2014-10-22  Ethan Alan Hereth <e.a.hereth@gmail.com>

	Merge remote-tracking branch 'upstream/develop' into develop

2014-10-22  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Minor spelling corrections

2014-10-19  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Remove mathbf from webpage

2014-10-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote-tracking branch 'toby/develop' into develop

2014-10-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Tweak connectivity_bcast

2014-10-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Whitespace on connectivity_bcast

2014-10-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge 'johannes/develop' for connectivity_bcast

2014-10-13  Toby Isaac <tisaac@ices.utexas.edu>

	* : mathjax on webpage

2014-10-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update web page

2014-10-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2014-10-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Expose brick connectivity to wrap

2014-10-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into wrap

2014-10-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix another warning

2014-10-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge neighbor_corner functions

2014-10-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix some warnings with --pedantic

2014-10-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Implement inter-tree corner corners in p4est_mesh

2014-10-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Assign some shortcut variables

2014-10-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Simplify one neighbor_corner_set situation

2014-10-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write face_neighbor_corner_orientation

2014-10-10  Toby Isaac <tisaac@ices.utexas.edu>

	* : P4EST_MPI->P4EST_ENABLE_MPI in ghost

2014-10-10  Toby Isaac <tisaac@ices.utexas.edu>

	* : address some compiler warnings

2014-10-10  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge minor web page update

2014-10-10  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Tweak web page

2014-10-10  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc for config fixes

2014-10-07  Johann Rudi <johann@ices.utexas.edu>

	* : p4est_lnodes: Fix variable re-declaration.

2014-10-07  Johann Rudi <johann@ices.utexas.edu>

	* : p4est_ghost: Fix variable re-declaration.

2014-10-07  Johann Rudi <johann@ices.utexas.edu>

	* : p4est_algorithms: Put storage class first.

2014-10-07  Johann Rudi <johann@ices.utexas.edu>

	* : p4est_lnodes: Fix unused variable, print statements.

2014-10-07  Johann Rudi <johann@ices.utexas.edu>

	* : p4est_ghost: Fix variable redeclaration, variable casting for
	print.

2014-10-07  Johannes Holke <holke@ins.uni-bonn.de>

	Merge branch 'develop' of https://github.com/cburstedde/p4est
	into develop

2014-09-22  Toby Isaac <tisaac@ices.utexas.edu>

	* : mark error on website

2014-09-20  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Some search and replace in examples

2014-09-20  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Some search and replace in test

2014-09-20  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Run s/P4EST_DEBUG/P4EST_ENABLE_DEBUG/

2014-09-20  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Replace some P4EST_MPI with P4EST_ENABLE_MPI

2014-09-20  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix MPI warning in lnodes

2014-09-19  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Initial commit of vtu cell data export logic  This is a bit of a
	mess currently but it works; p4est_vtk_write_header has been
	hijacked to append the custom cell data to the tree/level/rank cell
	data exported therein. I do not like this solution but I do not want
	to mess too much with p4est's paradigm without discussing it with
	the main developers.

2014-09-18  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Tweak documentation

2014-09-18  Ethan Alan Hereth <e.a.hereth@gmail.com>

	Merge remote-tracking branch 'upstream/develop' into develop
	Conflicts: 	src/p4est_mesh.h

2014-09-18  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Fix typos and tweak documentation

2014-09-01  Johannes Holke <holke@ins.uni-bonn.de>

	* : Added two assertions to connectivity_bcast Also added comments
	in corresponding .h files

2014-08-27  Toby Isaac <tisaac@ices.utexas.edu>

	* : replace deprecated P4EST_ with P4EST_WITH_

2014-08-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Whitespace

2014-08-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote-tracking branch 'toby/petsc-dmplex' into develop

2014-08-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2014-08-26  Johannes Holke <holke@ins.uni-bonn.de>

	* : A few modifications in p4est_connectivity_bcast

2014-08-26  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update AUTHORS  The contact information consisted of old UT
	Austin addresses. I have removed that block at the end of the file,
	same in libsc.

2014-08-26  Toby Isaac <tisaac@ices.utexas.edu>

	* : use PETSc's configure logic

2014-08-26  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add to paragraph on mailing list

2014-08-23  Toby Isaac <tisaac@ices.utexas.edu>

	* : plex: clean c++ compile

2014-08-23  Toby Isaac <tisaac@ices.utexas.edu>

	* : plex: indent

2014-08-22  Toby Isaac <tisaac@ices.utexas.edu>

	* : plex: put PetscSF in test

2014-08-22  Toby Isaac <tisaac@ices.utexas.edu>

	* : plex: mpiexec -n 2 test/p{4,8}est_test_plex passes  mpiexec -n 2
	test/p8est_test_plex -dm_view vtk:test_plex.vtk:ASCII_VTK
	-dm_view_partition

2014-08-22  Toby Isaac <tisaac@ices.utexas.edu>

	* : plex: passes mpiexec -n 2 test/p4est_test_plex

2014-08-22  Toby Isaac <tisaac@ices.utexas.edu>

	* : plex: added reference tree routines to test_plex

2014-08-22  Toby Isaac <tisaac@ices.utexas.edu>

	* : plex: fix orientation/child combination

2014-08-22  Toby Isaac <tisaac@ices.utexas.edu>

	* : plex: test_plex passes 2d, serial, with refinement

2014-08-22  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Webpage: p4est has three authors

2014-08-22  Toby Isaac <tisaac@ices.utexas.edu>

	* : plex: fix p4est_to_plex_face_orientation  I was counting
	orientation relative to vertices, not edges.

2014-08-22  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update contact email in p4est-howto.pdf

2014-08-22  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Change contact email to p4est@librelist.com

2014-08-22  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Tweak homepage

2014-08-22  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add user pointer to wrap structure

2014-08-22  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Establish working SC_IS_BIGENDIAN #define

2014-08-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : plex: first attempt at comparing vtk: still bugs

2014-08-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : plex: test_plex runs, 3d, serial

2014-08-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : plex: compute coordinates

2014-08-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : plex: test clean, 2d, 1 proc, no refinement

2014-08-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : plex: start test_plex

2014-08-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : plex: orientation fix to match petsc

2014-08-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : added petsc config option

2014-08-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : plex: added .h files

2014-08-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : plex: put in p4est_to_plex transforms

2014-08-19  Johannes Holke <holke@ins.uni-bonn.de>

	* : Implemented the connectivity_bcast function

2014-08-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : added p8est_plex.c

2014-08-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : plex is almost done

2014-08-19  Toby Isaac <tisaac@ices.utexas.edu>

	* : compiles

2014-08-19  Toby Isaac <tisaac@ices.utexas.edu>

	* : saving progress on p4est_plex

2014-08-15  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Use mesh_new_ext in wrap

2014-08-15  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Clarify edge and corner corners in p4est_mesh

2014-08-07  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Encode mesh corners across inter-tree face

2014-08-07  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Separate corner allocation in p4est_mesh

2014-08-07  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Slight rearrange in p4est_mesh iter_corner

2014-08-07  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix p4est_mesh quad_level to include QMAXLEVEL

2014-08-08  Toby Isaac <tisaac@ices.utexas.edu>

	* : start p4est_plex

2014-08-06  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Straighten out usage of btype in mesh_new_ext

2014-08-06  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge warning fixes into develop

2014-08-06  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Revert "example/mesh: add missing header files"  This reverts
	commit f063a3b7db0ee20fcce0c7bee761e4c143fccde6.

2014-08-06  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update error message

2014-08-06  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Remove warning

2014-08-06  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: fix c++ compile

2014-08-05  Toby Isaac <tisaac@ices.utexas.edu>

	* : added p4est_ghost_expand_by_lnodes()

2014-08-05  Toby Isaac <tisaac@ices.utexas.edu>

	* : move p4est_ghost_support_nodes() to p4est_ghost_support_lnodes()
	clean up p4est_ghost_support_lnodes

2014-08-04  Toby Isaac <tisaac@ices.utexas.edu>

	* : added checksums to p4est_ghost_is_valid()  fixes to
	p4est_ghost_is_valid()

2014-08-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : added p4est_ghost_support_nodes()  ghost:
	p4est_ghost_support_nodes() compiles  fixes to
	p4est_ghost_support_nodes()  limit test of support_nodes() to 2
	procs for now

2014-07-22  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: added degree < 0 to handle lower-dimensional continuity


2014-08-06  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: fix unused

2014-08-06  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add defines to facilitate Fortran 90 wrapping

2014-08-06  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Tweaks

2014-08-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write p8est_connectivity_face_neighbor_corner

2014-08-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Extend example/mesh/periodicity

2014-08-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Second partial fix

2014-08-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Possible partial fix

2014-08-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Make a demo that crashes join_faces

2014-08-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge change of geometry coordinate system

2014-08-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update AUTHORS

2014-08-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : White space

2014-08-05  Hannes Frank <frank@iag.uni-stuttgart.de>

	* : Modified tests to work with previous change.

2014-08-04  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Attribute bytes per tree can now be chosen

2014-08-04  Hannes Frank <frank@iag.uni-stuttgart.de>

	* : whitespace

2014-08-04  Hannes Frank <frank@iag.uni-stuttgart.de>

	* : Trilinear interpolation to physical coordinates.

2014-07-22  Toby Isaac <tisaac@ices.utexas.edu>

	* : example/mesh: add missing header files

2014-08-04  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Minor cleanup in p4est_geometry

2014-08-04  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Prepare using connectivity from geometry

2014-08-04  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add virtual destructor to p4est_geometry_t

2014-08-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'wrap' into develop

2014-08-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Indent p4est_wrap

2014-07-24  Toby Isaac <tisaac@ices.utexas.edu>

	* : clean compile with CC=mpicxx

2014-08-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Replace assertions with checks in read_inp_stream

2014-08-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote-tracking branch 'johannes/develop' into develop

2014-08-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Make p4est_wrap_new_conn extern

2014-08-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Revert "Add a geometry field to p4est_wrap"  This reverts commit
	ae342ebf5aa85264620214bb092633dc38812c51. Maybe the geometry should
	not be forced to live in the wrapper.

2014-07-31  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add a geometry field to p4est_wrap

2014-07-29  Johannes Holke <holke@ins.uni-bonn.de>

	* : removed unused variable

2014-07-29  Johannes Holke <holke@ins.uni-bonn.de>

	* : Added type casts to p4est_ghost_is_valid

2014-07-29  Johannes Holke <holke@ins.uni-bonn.de>

	* : Removed unneccessary variable and is_valid test from
	p4est_connectivity_reduce

2014-07-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Smooth over web page again

2014-07-28  Johannes Holke <holke@ins.uni-bonn.de>

	* : Added connectivity_is_valid assertion to
	p4est_connectivity_reduce

2014-07-28  Johannes Holke <holke@ins.uni-bonn.de>

	* : In test_conn_reduced chagend char* to const char*.

2014-07-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge dangling commit on 'fortran90'

2014-07-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Close issue on reading mesh file

2014-07-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Enable backward compatibility with p4est-setup

2014-07-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Tweak README

2014-07-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update README and NEWS

2014-07-23  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge Lucas' updates on connectivity_read_inp

2014-07-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: doxygen

2014-07-23  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update AUTHORS

2014-07-23  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote-tracking branch 'alex/develop'

2014-07-22  Alex Fikl <alexfikl@gmail.com>

	* : added p4est_mesh docs to p8est_mesh as well

2014-07-21  Alex Fikl <alexfikl@gmail.com>

	* : fixed calculation of used memory for p4est_mesh_t. minor style
	fixes

2014-07-22  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Smooth over web page

2014-07-21  Lucas C Wilcox <lucas@swirlee.com>

	* : Add some error checking when reading inp files

2014-07-21  Lucas C Wilcox <lucas@swirlee.com>

	* : Add comments for p8est inp reader

2014-07-21  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge Toby's develop + p6est branch

2014-07-21  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fixes for the C++ compile

2014-07-21  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix missing headers

2014-07-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : webpage: Toby's homepage

2014-07-21  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'p6est' into develop

2014-07-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : mesh: address unitialized / undeclared compiler warnings

2014-07-21  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge p4est_mesh changes

2014-07-21  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Small edits to connectivity_read_inp

2014-07-21  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Comment on bugs

2014-07-21  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc.  The gitmodule points to github now.

2014-07-17  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc and generate doxygen tags  libsc now has a fortran
	90 configuration

2014-07-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Run doxygen -u Doxyfile.in

2014-07-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Documentation update

2014-07-15  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Move p8est_trilinear to attic  The p8est_trilinear interface is
	only used in the Rhea code. The p8est_trilinear* files have been
	moved to doc/attic. They should be copied into the Rhea code for its
	next update.

2014-07-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Edits to mainpage.dox

2014-07-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Reuse hanging_corner

2014-07-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Indent and comment updates

2014-07-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Extend step4 example to 3D

2014-07-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix comment typos

2014-07-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote-tracking branch 'ethan/develop'

2014-07-09  Johannes Holke <holke@ins.uni-bonn.de>

	* : fixed a typo

2014-07-09  Johannes Holke <holke@ins.uni-bonn.de>

	* : corrected a wrong comment for ghost_is_valid

2014-07-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Webpage fix

2014-07-08  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Minor doc updates

2014-07-04  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Move .gitignore file to .git/info/exclude

2014-07-04  Ethan Alan Hereth <e.a.hereth@gmail.com>

	Merge remote-tracking branch 'upstream/develop' into develop
	Conflicts: 	src/p8est_mesh.h

2014-07-04  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Random typo corrections

2014-07-04  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Homepage now identical to p4est.github.io

2014-07-03  Alex Fikl <alexfikl@gmail.com>

	* : implemented p4est_mesh_new_ext: it takes an extra
	compute_tree_index and compute_level_lists booleans to fill the
	corresponding members of p4est_mesh_t

2014-07-03  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : This seems to be the path for p4est.github.io

2014-07-03  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Bend some links away from p4est.org

2014-07-03  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix some web issues

2014-07-03  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Tweak main page and add p4est-howto.pdf

2014-07-03  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'develop' into p6est

2014-07-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Change link

2014-07-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : Wrote some mainpage.dox

2014-07-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update web page content

2014-07-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2014-07-02  Johannes Holke <holke@ins.uni-bonn.de>

	* : fixed a typo

2014-07-02  Johannes Holke <holke@ins.uni-bonn.de>

	* : added connectivity_reduce tests

2014-07-02  Johannes Holke <holke@ins.uni-bonn.de>

	* : implemented p4est_connectivity_reduce.

2014-07-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Remove a warning

2014-07-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge updated 'step-2' into develop

2014-07-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Grab current web page content

2014-07-02  Lucas C Wilcox <lucas@swirlee.com>

	* : Have step 2 use uniform refinement

2014-07-02  Lucas C Wilcox <lucas@swirlee.com>

	* : Error out if inp mesh has 0 elements or vertices  This covers
	the case when the mesh reader is called on files that are not inp
	meshes.  Hopefully providing the user some information about why the
	code fails.

2014-07-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Some cleanup in doc/

2014-07-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : We are done with the TODO file

2014-07-02  Lucas C Wilcox <lucas@swirlee.com>

	* : Make the refinement level optional in step-2

2014-07-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Bump version numbers in bug data base

2014-07-01  Lucas C Wilcox <lucas@swirlee.com>

	* : Add some documentation for the .inp mesh reader

2014-07-02  Johannes Holke <holke@ins.uni-bonn.de>

	* : example meshes are now installed in data directory

2014-07-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : More doc tweaks on step4

2014-07-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Some more tweaks to step4

2014-07-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Smooth over cg routine

2014-07-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : finish step4

2014-07-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Set Dirichlet rhs nodes to zero

2014-07-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into step4

2014-07-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Minor dox on step2

2014-07-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge 'toby/develop' into develop

2014-07-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : ghost doxygen

2014-07-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Compute domain volume correctly

2014-07-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : add some libsc to doxygen

2014-07-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : more header file doxygen

2014-07-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into step4

2014-07-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge lucas' step2 into develop

2014-07-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : bits: doxygen

2014-07-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : vtk doxygen

2014-07-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : p4/8est_connectivity.h: doxygen

2014-07-01  Lucas C Wilcox <lucas@swirlee.com>

	* : doxygenate step-2

2014-07-01  Lucas C Wilcox <lucas@swirlee.com>

	* : Add GMSH based geometry and mesh files for step-2

2014-07-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : p4est_base.h: doxygen

2014-07-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : p4est.h, p8est.h: doxygen

2014-07-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Temporary: step4

2014-07-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : comment formating to match p4est-howto.

2014-07-01  Lucas C Wilcox <lucas@swirlee.com>

	* : Add reordering of connectivity to step-2

2014-07-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Compute node info in p4est_step4

2014-07-01  Lucas C Wilcox <lucas@swirlee.com>

	* : Add some output for read inp

2014-07-01  Lucas C Wilcox <lucas@swirlee.com>

	* : Remove debug output from inp reader

2014-07-01  Lucas C Wilcox <lucas@swirlee.com>

	* : Add Cubit mesh files for step-2

2014-07-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2014-07-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix some warnings

2014-07-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge initial work on step4

2014-07-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote-tracking branch 'lcwhub/step-2' into develop

2014-07-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote-tracking branch 'toby/step-3' into develop

2014-07-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix typo

2014-06-30  Lucas C Wilcox <lucas@swirlee.com>

	* : Add a interesting refinement function to step 2

2014-06-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : step-3: inden

2014-06-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : step-3: doxygenated

2014-06-30  Lucas C Wilcox <lucas@swirlee.com>

	* : Have step2 read an .inp file

2014-06-30  Lucas C Wilcox <lucas@swirlee.com>

	* : Add functions for reading an ABAQUS .inp  Both GMSH and Cubit
	can generate ABAQUS .inp files.  These functions presented here read
	the .inp files a build the associated connectivity.

2014-06-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : step-3: fix coarsening

2014-06-30  Lucas C Wilcox <lucas@swirlee.com>

	* : Have p4estindent find indent installed by Homebrew  On OS X the
	package manager Homebrew installs gnu-indent as gindent. This change
	allows the p4estindent script to find gindent.

2014-06-29  Lucas C Wilcox <lucas@swirlee.com>

	* : Use step1 as a starting point for step2

2014-06-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : step-3: encountered error, switch to full boundary layer until
	fixed.

2014-06-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : step-3: added to lint sources

2014-06-30  Toby Isaac <tisaac@ices.utexas.edu>

	Merge remote-tracking branch 'carsten/develop' into step-3
	Conflicts: 	example/steps/Makefile.am

2014-06-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : step-3: everything works except for stable coarsening.

2014-06-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Work on node initialization

2014-06-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Some progress on step4

2014-06-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Implement refinement/partition loop in step4

2014-06-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : step-3: start timestepping

2014-06-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Doc updates on hw32.h

2014-06-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Doxygen updates for example/steps

2014-06-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : step-3: initial refinement, coarsening, and vtk

2014-06-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Start step4 example

2014-06-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : README updates

2014-06-16  Toby Isaac <tisaac@ices.utexas.edu>

	* : mesh: add p4est_mesh_face_neighbor_data

2014-06-29  Toby Isaac <tisaac@ices.utexas.edu>

	* : saving start of step3

2014-06-29  Toby Isaac <tisaac@ices.utexas.edu>

	* : copy step1 to step3 to start

2014-06-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Text updates

2014-06-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Tweaks to p4est_step1

2014-06-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Finish example step1

2014-06-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Start example/steps/p4est_step1

2014-06-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Remove examples sieve and second

2014-06-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Pull in the fortran 90 additions to libsc

2014-06-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2014-06-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Check for sc submodule in bootstrap

2014-06-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add basic doxygen system

2014-06-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Reduce dependency on headers

2014-06-10  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'develop' into p6est

2014-05-26  Ethan Alan Hereth <e.a.hereth@gmail.com>

	Merge remote-tracking branch 'upstream/develop' into develop

2014-05-26  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Improve .gitignore file  This commit cleans up the .gitignore
	file. It now only ignores generated files that are always created in
	the source tree.

2014-05-22  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Commit juqueen build script

2014-05-19  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Add local .gitignore file

2014-05-18  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Close a bug

2014-05-18  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Use 2D identity in test_coarsen2.c

2014-05-18  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Implement 2D version of simplified geometry

2014-05-18  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Strip down p8est_geometry

2014-05-18  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Indent p4est_vtk

2014-05-17  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge 'ethan/vtk_write_levels' into develop

2014-05-17  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Revert "Run indent on p4est_vtk" to ease merge  This reverts
	commit 7557478b5ef16b3b012afc606a69c6bba031ed4b.

2014-05-15  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'develop' into p6est  Conflicts: 	src/p4est.c

2014-04-25  Toby Isaac <tisaac@ices.utexas.edu>

	* : tsearch: make skipping time_search_1 an option

2014-04-24  Toby Isaac <tisaac@ices.utexas.edu>

	* : added ray tracing to tsearch example

2014-04-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : compiler warning: initialize two partition variables

2014-04-08  Toby Isaac <tisaac@ices.utexas.edu>

	* : added p4est_source_ext  fix _load logging  added
	p4est_source_ext  Conflicts: 	src/p4est.c 	src/p4est_base.h

2014-01-17  Toby Isaac <tisaac@ices.utexas.edu>

	* : partition: p.user_data is sent as-is, unless data_size > 0.

2014-05-15  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'develop' into p6est  Conflicts: 	src/p4est_ghost.c
	src/p4est_lnodes.c

2014-05-07  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: removed bad logic for tracking hanging edges.  The logic
	was: if the face isn't hanging, then the edges of the face can't be
	hanging.  That is wrong, wrong, wrong.

2014-05-05  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: log order and number of global nodes  Conflicts:
	src/p4est_lnodes.c

2014-05-14  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Twiddle the order of the some of the export logic  This commit
	makes the order that the {write_tree,write_level,write_rank} boolean
	logic gets visited consistent throughout the file.

2014-05-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Edit bug database

2014-05-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Move p4est_inspect into p4est_extended

2014-05-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update AUTHORS

2014-05-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Run indent on p4est_vtk

2014-05-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge 'ethan/vtk_write_levels' into develop

2014-05-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Clarify comments on p4est load/save

2014-05-13  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Export octree level data in uint8 format

2014-05-13  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Bug fix  The cell data section of the vtu file was not being
	properly closed when only writing octree level data.

2014-05-13  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Bug fix  Memory was being free'd in an inappropriate if
	statement.

2014-05-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update/BREAK p4est api  Remove P*EST_CONNECT_DEFAULT.  There was
	no rationale for any default. Remove P*EST_BALANCE_*
	enumeration/type; it was obsolete. Introduce allow_for_coarsening
	parameter in p4est_partition. Also improve some comments.

2014-05-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Make separate primitive plots in timana.sh

2014-05-12  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Tweak the vtk octree level export logic  This commit corrects a
	couple snprintf errors and uses an uint8_t array to store the level
	data during a binary vtk export.

2014-05-09  Ethan Alan Hereth <e.a.hereth@gmail.com>

	* : Add tree levels to the vtk output  This commit add the option to
	output the octant levels to the vtk visualization file.

2014-05-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge new p4est_ghost_is_valid function

2014-05-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge Johannes' author file into develop

2014-05-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Submit issue on ghost

2014-05-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Activate check with p4est_ghost_is_valid

2014-05-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Cosmetic changes to ghost_is_valid

2014-05-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update issue

2014-05-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc; add thanks-to

2014-05-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge pull request #4 from tamiko/fix_soname  Set soname of the
	p4est library to the current version

2014-05-07  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: removed bad logic for tracking hanging edges.  The logic
	was: if the face isn't hanging, then the edges of the face can't be
	hanging.  That is wrong, wrong, wrong.

2014-05-07  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'develop' into p6est  Conflicts:
	src/p4est_lnodes.c

2014-05-07  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: removed bad logic for tracking hanging edges.  The logic
	was: if the face isn't hanging, then the edges of the face can't be
	hanging.  That is wrong, wrong, wrong.

2014-05-06  Johann Rudi <johann@ices.utexas.edu>

	* : Activate communication test again.

2014-04-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: fix buggy conditional.  I was thought I was testing
	if ((eside->is_hanging && eside->is.hanging.quad[0] &&
	eside->is.hanging.quad[1]) ||       (!eside->is_hanging &&
	eside->is.full.quad)) {     // ...   }  but what I had was    if
	((eside->is_hanging && eside->is.hanging.quad[0] &&
	eside->is.hanging.quad[1]) ||       eside->is.full.quad) {     //
	...   }  It turns out we can completely skip the hanging case, and
	it works correctly: there is always a full side with a quadrant
	present.

2014-05-05  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: log order and number of global nodes  Conflicts:
	src/p4est_lnodes.c

2014-05-05  Toby Isaac <tisaac@ices.utexas.edu>

	* : search: try more aggressive pruning

2014-05-05  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: log order and number of global nodes

2014-04-25  Toby Isaac <tisaac@ices.utexas.edu>

	* : tsearch: make skipping time_search_1 an option

2014-05-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Comment on is_ancestor issue

2014-05-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add issue on library versioning

2014-05-02  Matthias Maier <matthias.maier@iwr.uni-heidelberg.de>

	* : Set soname of the p4est library to the current version

2014-04-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Extend installation information

2014-04-25  Toby Isaac <tisaac@ices.utexas.edu>

	* : README: added a brief description of installing from source.

2014-04-25  Toby Isaac <tisaac@ices.utexas.edu>

	Merge remote-tracking branch 'origin/develop' into p6est

2014-04-25  Toby Isaac <tisaac@ices.utexas.edu>

	* : p4est_searcH: use nearest_common_ancestor.

2014-04-24  Toby Isaac <tisaac@ices.utexas.edu>

	* : added ray tracing to tsearch example

2014-04-24  Johannes Holke <holke@ins.uni-bonn.de>

	* : Fixed an operator precedence error.

2014-04-22  Johannes Holke <holke@ins.uni-bonn.de>

	* : Repaired a failed merge.

2014-04-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : libsc update

2014-04-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: fix buggy conditional.  I was thought I was testing
	if ((eside->is_hanging && eside->is.hanging.quad[0] &&
	eside->is.hanging.quad[1]) ||       (!eside->is_hanging &&
	eside->is.full.quad)) {     // ...   }  but what I had was    if
	((eside->is_hanging && eside->is.hanging.quad[0] &&
	eside->is.hanging.quad[1]) ||       eside->is.full.quad) {     //
	...   }  It turns out we can completely skip the hanging case, and
	it works correctly: there is always a full side with a quadrant
	present.

2014-04-22  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: put zlib.h in P4EST_HAVE_ZLIB

2014-04-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : libsc update

2014-04-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: fix buggy conditional.  I was thought I was testing
	if ((eside->is_hanging && eside->is.hanging.quad[0] &&
	eside->is.hanging.quad[1]) ||       (!eside->is_hanging &&
	eside->is.full.quad)) {     // ...   }  but what I had was    if
	((eside->is_hanging && eside->is.hanging.quad[0] &&
	eside->is.hanging.quad[1]) ||       eside->is.full.quad) {     //
	...   }  It turns out we can completely skip the hanging case, and
	it works correctly: there is always a full side with a quadrant
	present.

2014-04-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : compiler warning: initialize two partition variables

2014-04-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : compile and test clean without mpi

2014-04-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est_test_all: disc -> disk

2014-04-21  Toby Isaac <tisaac@ices.utexas.edu>

	Merge remote-tracking branch 'carsten/newmpi' into p6est-newmpi
	Conflicts: 	Makefile.am 	src/Makefile.am

2014-04-14  Johannes Holke <holke@ins.uni-bonn.de>

	* : Fixed bugs in p4est_ghost_is_valid.

2014-04-11  Johannes Holke <holke@ins.uni-bonn.de>

	* :  Improved the p4est_ghost_is_valid function.

2014-04-08  Johannes Holke <holke@ins.uni-bonn.de>

	* : Improved the p4est_ghost_is_valid function.

2014-04-11  Johannes Holke <holke@ins.uni-bonn.de>

	* : Added a comment.

2014-04-09  Johannes Holke <holke@ins.uni-bonn.de>

	* : Edited a comment.

2014-04-09  Johannes Holke <holke@ins.uni-bonn.de>

	* : Update to p4est_ghost_is_valid.

2014-04-11  Johannes Holke <holke@ins.uni-bonn.de>

	* :  Improved the p4est_ghost_is_valid function.

2014-04-07  Johannes Holke <holke@ins.uni-bonn.de>

	* : Implemented the p4est_ghost_is_valid function.

2014-04-11  Johannes Holke <holke@ins.uni-bonn.de>

	* : Added doc/author_holke.txt

2014-04-14  Johann Rudi <johann@ices.utexas.edu>

	* : Hide assert that causes problems.

2014-04-12  Johann Rudi <johann@ices.utexas.edu>

	Merge remote-tracking branch 'origin/partition-lnodes' into next


2014-04-12  Johann Rudi <johann@ices.utexas.edu>

	* : Make partition for coarsening function not static.

2014-04-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2014-04-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Paranoid variable rename and fix warnings in ghost

2014-04-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Make timings/tsearch compile without MPI

2014-04-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into simplify  This merge integrates the
	iterate and lnodes rewrite with the simplification of the configure
	logic.

2014-04-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update sc simplify branch

2014-04-09  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: fix bad indexing after p6est_load in parallel

2014-04-09  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est_lnodes: fixed "race condition" in identifying hanging
	nodes.

2014-04-08  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est_vtk: support scale = 1.

2014-04-08  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'develop' into p6est

2014-04-08  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: document p6est_new_from_p4est

2014-04-08  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add issue on non-MPI warnings

2014-04-08  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'timings' into develop

2014-04-08  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge 'simplify-lnodes' into develop

2014-04-08  Toby Isaac <tisaac@ices.utexas.edu>

	* : fix _load logging

2014-04-07  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: add p6est_new_from_p4est

2014-04-07  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Indent some files under src

2014-04-03  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Edit comment in p4est_lnodes.h

2014-04-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add a more serious issue on neighborhood_owned

2014-04-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add bug report on optimizing neighborhood_owned

2014-04-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Make p4est-setup.sh more portable

2014-04-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update sc; p4est-setup.sh uses --disable-mpithread

2014-04-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update to latest libsc simplify branch

2014-03-31  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Typo in p4est_metis.m4

2014-03-31  Toby Isaac <tisaac@ices.utexas.edu>

	* : timings: time lnodes 1, 3, 7

2014-03-30  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'simplify-lnodes' into timings

2014-03-29  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'simplify-lnodes' into merge-lnodes-p6est

2014-03-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into simplify

2014-03-28  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'develop' into merge-develop-lnodes  Conflicts:
	example/timings/timings2.c

2014-03-28  Toby Isaac <tisaac@ices.utexas.edu>

	* : partition_for_coarsening: fix bad conditional.  We only want to
	read the array when we haven't gone past the end, the other half of
	the conditionall wasn't necessary, and caused segfaults in some
	situations.

2014-03-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Expose partition_for_coarsening to API

2014-03-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Move wait for send down in partition_for_coarsen.

2014-03-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add an issue

2014-03-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add issue on VTK write

2014-03-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Bug updates

2014-03-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Move webpage files into subdirectory

2014-03-26  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'simplify-lnodes' into p6est

2014-03-24  Toby Isaac <tisaac@ices.utexas.edu>

	* : remove one level from perfscript.sh  perf's measurements are too
	noisy for very small problem sizes

2014-03-22  Toby Isaac <tisaac@ices.utexas.edu>

	* : improve perfscript.sh portability

2014-03-22  Toby Isaac <tisaac@ices.utexas.edu>

	* : perfscript.sh revisions

2014-03-22  Toby Isaac <tisaac@ices.utexas.edu>

	* : timings: use perf to compare nodes and lnodes

2014-03-21  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'simplify-lnodes' into timings

2014-03-21  Toby Isaac <tisaac@ices.utexas.edu>

	Merge remote-tracking branch 'carsten/lnodes' into
	simplify-lnodes

2014-03-18  Toby Isaac <tisaac@ices.utexas.edu>

	* : iterate: fix edge remote callback  We were trying to find a
	hanging face between two ghosts, and we should have made sure we
	weren't past the edge of the ghost layer.

2014-03-18  Toby Isaac <tisaac@ices.utexas.edu>

	* : iterate: fix edge remote callback  We were trying to find a
	hanging face between two ghosts, and we should have made sure we
	weren't past the edge of the ghost layer.

2014-03-18  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update issue database

2014-03-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Extend tsearch script

2014-03-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Provide title option for timana script

2014-03-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write analysis scripts for tsearch

2014-03-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Set level-shift default to 4 in tsearch

2014-03-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add a 2/3 scaling line to balance plot

2014-03-12  Toby Isaac <tisaac@ices.utexas.edu>

	* : Commit Toby's updates to timana.sh

2014-03-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into simplify

2014-03-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update to latest sc simplify branch

2014-03-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add another refine function and indent

2014-03-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add single searches for comparison

2014-03-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Keep number of expected matches as double variable

2014-03-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Assign search result to point

2014-03-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Isolate construction of points into function

2014-03-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Complete search application

2014-03-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write inverse coordinate transformation

2014-03-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Use more sensible z coordinate definition

2014-03-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write more compact forward coordinate transf.

2014-03-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Clarify tsearch

2014-03-10  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Work on forward geometry transformation

2014-03-10  Toby Isaac <tisaac@ices.utexas.edu>

	* : testing partition_lnodes

2014-03-10  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add some global data to tsearch

2014-03-10  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add per-quadrant callback to p4est_search

2014-03-10  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Change p4est_search callback convention

2014-03-10  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Call p4est_search with dummy callback

2014-03-10  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Make VTK write an option in tsearch

2014-03-06  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'next' into develop

2014-03-06  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2014-03-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix bug in p4est_nodes with node-empty processors

2014-03-04  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Start example to time p4est_search

2014-03-04  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Upgrade libsc

2014-03-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Comment on issue that seems resolved

2014-03-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix bug in p4est_nodes with node-empty processors

2014-03-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix a warning

2014-03-04  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'simplify-lnodes' into p6est

2014-03-04  Toby Isaac <tisaac@ices.utexas.edu>

	* : nodes: update bug description

2014-03-04  Toby Isaac <tisaac@ices.utexas.edu>

	* : timings: added options for higher order lnodes

2014-03-04  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: bug fixes for orders > 1

2014-03-03  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added bug for nodes assertion

2014-03-03  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'simplify-lnodes' into p6est

2014-03-03  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: fix a bug about determining ownership on edges

2014-02-28  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: skip self-union when balancing

2014-02-28  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'simplify-lnodes' into p6est

2014-02-28  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: make load/save optional in p6est_test_all

2014-02-28  Toby Isaac <tisaac@ices.utexas.edu>

	* : iterate: proposed bugfix for juqueen/rotcubes bug

2014-02-28  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: new counter to reduce balance work

2014-02-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Deactivate timing of trilinear_mesh_new by default

2014-02-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Correct / edit plot script

2014-02-22  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: small logging correction

2014-02-21  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'p6est' of /h2/tisaac/repos/p4est into p6est

2014-02-19  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: try to cut down on balance work

2014-02-19  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: inline statics

2014-02-19  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add plot script

2014-02-19  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add element count to output filter

2014-02-19  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add awk script to extract run times from log

2014-02-19  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Make timings output dimension independent

2014-02-18  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add rule to clean .p6p files

2014-02-18  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add option to choose save filename

2014-02-18  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add issue on p6est warning

2014-02-18  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Prevent segv on option error

2014-02-17  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: fix p6est_tree_get_vertices

2014-02-18  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Force build of p6est_test_programs on make install

2014-02-18  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Remove warnings for non-MPI build

2014-02-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: make p6est_test_all act like p4est_timings

2014-02-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : iterate: fix uninitialized values.

2014-02-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: small tweak  use push_count instead of push inside a
	loop

2014-02-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : iterate: fix uninitialized values.

2014-02-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: small tweak  use push_count instead of push inside a
	loop

2014-02-14  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'simplify-lnodes' into p6est

2014-02-14  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: test_new_destroy -> test_all

2014-02-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Close issue

2014-02-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add latest checksums to timings

2014-02-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Make timings partition-independent

2014-02-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add option to recreate old timings checksums

2014-02-14  Toby Isaac <tisaac@ices.utexas.edu>

	* : iterate: fixed bug about bad adjacency description  This bug
	caused an assertion in lnodes

2014-02-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Make timings partition-independent

2014-02-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Comment on lnodes issue

2014-02-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : File an lnodes issue

2014-02-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add option to recreate old timings checksums

2014-02-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge old maintained 'v0.3.4.2' into mainline

2014-02-13  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: fix a bug in recently changed lnodes

2014-02-12  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: lnodes with ordering that matches underlying p4est
	ordering

2014-02-12  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: fixed some omissions in the implementation of
	p6est_lnodes

2014-02-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Clean up MPI wrapping

2014-02-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update to latest sc/simplify

2014-02-11  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: moved _ext headers to extended file

2014-02-10  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'ghost' into simplify-lnodes

2014-02-09  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'develop' into p6est  Conflicts: 	sc

2014-02-08  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into simplify

2014-02-08  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc 'simplify' branch

2014-02-08  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add an issue

2014-02-08  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Remove some warnings

2014-02-08  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2014-01-26  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fixes for cxx compile

2014-02-08  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Comment on issue

2014-02-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : Comment on io issue

2014-01-24  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: properly initialize own buffer in share_owned

2014-01-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: create an empty buffer for sending to self  This keeps
	the indexing consistent  Conflicts: 	src/p4est_lnodes.c

2014-01-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Comment on two issues

2014-01-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update to sc's log indent feature

2014-01-27  Toby Isaac <tisaac@ices.utexas.edu>

	* : added a parallel I/O issue

2014-01-23  Toby Isaac <tisaac@ices.utexas.edu>

	* : issue: make communication routines from lnodes reusable

2014-01-27  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: make lnodes_code match the ordering of the faces

2014-01-27  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: load passes simple test

2014-01-27  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: load works on 2 procs.

2014-01-27  Toby Isaac <tisaac@ices.utexas.edu>

	* : added p4est_source_ext

2014-01-24  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: save passes simple test

2014-01-24  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: added checksum

2014-01-24  Toby Isaac <tisaac@ices.utexas.edu>

	* : use new sc log_indent feature

2014-01-24  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: properly initialize own buffer in share_owned

2014-01-24  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: added production logging

2014-01-23  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: lnodes passes simple tests

2014-01-23  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: reuse p8est_lnodes routines to finish p6est_lnodes

2014-01-23  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: p6est_lnodes compiles

2014-01-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: balance passes simple test

2014-01-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: profile balancing in parallel passes basic test

2014-01-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: create an empty buffer for sending to self  This keeps
	the indexing consistent

2014-01-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: local balance of profiles

2014-01-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : ghost: fix uninitialized mpi requests

2014-01-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: fixed bad sanity check in p6est_ghost_send_front_layers

2014-01-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : ghost: fix uninitialized mpi requests

2014-01-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: refactor p6est_ghost_new, add p6est_ghost_expand

2014-01-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: fix p2est_quadrant_compare_piggy.  We have to compare
	local number, because sorting based on coordinates requires the
	coordinates of the containing column, which aren't stored.

2014-01-17  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: ghost passes 63 proc test

2014-01-17  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: ghost passes 2 processor test

2014-01-17  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'merge-ghost-lnodes' into merge-p6est-ghost-lnodes


2014-01-16  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: started ghost.h

2014-01-16  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: partition passes test

2014-01-17  Toby Isaac <tisaac@ices.utexas.edu>

	* : partition: p.user_data is sent as-is, unless data_size > 0.

2014-01-16  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'ghost' into merge-ghost-lnodes  Conflicts:
	src/p4est_lnodes.c

2014-01-16  Toby Isaac <tisaac@ices.utexas.edu>

	* : bits: further fix face_neighbor_extra, this time return type

2014-01-16  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: partition_ext returns shipped

2014-01-16  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: wrote partition

2014-01-15  Toby Isaac <tisaac@ices.utexas.edu>

	Merge remote-tracking branch 'origin/hotfix-conn-equivalent'
	into simplify-lnodes

2013-12-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Clarify share_all documentation

2014-01-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: remove unused variables

2014-01-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: remove unused variable

2014-01-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: removed unused variable

2014-01-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: remove unused variable

2014-01-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : iterate: comment out unused function.

2014-01-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : indent

2014-01-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : bits: fix type of tree argument in face_neighbor_extra

2013-08-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Minor non-functional changes

2013-08-05  Toby Isaac <tisaac@ices.utexas.edu>

	* : ghost: change initialization of mirror fronts.  During the
	original ghost layer creation, the fronts are now copies of the same
	pointers for the full set of mirrors, and they're only changed when
	the ghost layer is expanded.

2013-08-04  Toby Isaac <tisaac@ices.utexas.edu>

	* : added p4est_ghost_expand: compiles and tests cleanly.  ghost:
	added p4est_ghost_expand: it compiles.

2014-01-15  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'develop' into simplify

2014-01-15  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update to merged sc simplify branch

2014-01-15  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote-tracking branch 'toby/hotfix-conn-equivalent' into
	develop

2014-01-15  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2014-01-15  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Comments in bootstrap

2014-01-15  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Adapt git-version-gen to new git submodules

2014-01-14  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: coarsen_layers passes simple test

2014-01-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Move config check forward in p4est_base.h

2014-01-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Move git-version-gen and git2cl into build-aux

2014-01-13  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: p4est_coarsen_columns passes basic test.

2014-01-13  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: wrote p6est_coarsen_all_layers    (prev.
	p6est_coarsen_layer_int)

2014-01-13  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: wrote most of p6est_coarsen_columns  still need to finish
	the internal function p6est_coarsen_layer_int

2014-01-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Edit for portability

2014-01-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2014-01-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Edit p4est_hypre.m4 for portability

2014-01-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Test for glibtoolize as required for mac

2014-01-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Adopt automake convention  and add comment

2014-01-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Use SC_ME_AS_SUBPACKAGE

2014-01-10  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: refine passing simple test

2014-01-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Enable dependencies on libsc.la

2014-01-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update metis configuration

2014-01-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Remove dysfunctional macros

2014-01-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Build system updates

2014-01-08  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: column and layer refinement compiles.

2014-01-08  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: simple vtk test passes in serial.

2014-01-08  Toby Isaac <tisaac@ices.utexas.edu>

	* : indent

2014-01-08  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: introduce p2est_quadrant_t, fit into work so far

2014-01-07  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: vtk compiles  Pretty much a copy, paste, replace from
	p4est_vtk, but support for nodes (scale == 1.) is removed, since
	there is no plan to implement p6est_nodes.  Possible TODO (use
	p4est_lnodes instead).

2014-01-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write subpackage source string to file

2014-01-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Macro fixes

2014-01-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add P4EST_AS_SUBPACKAGE macro

2014-01-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Comments in configure.ac

2014-01-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Move subpackage logic into libsc

2014-01-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Make dist allow default to yes

2014-01-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Use PREFIX in metis checks

2014-01-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Rework p4est configure logic

2014-01-04  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Isolate check for metis in separate m4 file

2014-01-03  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: started refine

2013-12-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Move iterate_ext into p4est_extended

2013-12-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Doc typos

2013-12-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update to current libsc

2013-12-30  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : remove BUILTIN_ALL_PREFIX

2013-12-19  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update configure.ac

2013-12-19  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libtool logic

2013-12-19  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Adapt libtoolize command line

2013-12-19  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update email address

2013-12-09  Toby Isaac <tisaac@ices.utexas.edu>

	* : p6est: added p6est_new(_ext)

2013-12-09  Toby Isaac <tisaac@ices.utexas.edu>

	* : Started p6est project

2013-11-13  Toby Isaac <tisaac@ices.utexas.edu>

	* : iterate: improve index copying

2013-11-13  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: use sc_array_truncate

2013-11-13  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: fix bug related to root quadrants

2013-11-13  Toby Isaac <tisaac@ices.utexas.edu>

	Merge remote-tracking branch 'carsten/lnodes' into
	simplify-lnodes  Conflicts: 	src/p4est_iterate.c

2013-11-13  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: fix bugs from simplification, tests cleanly

2013-11-13  Toby Isaac <tisaac@ices.utexas.edu>

	* : iterate: fix bugs for remote callbacks

2013-11-10  Toby Isaac <tisaac@ices.utexas.edu>

	* : iterate: small bug fix in init_edge

2013-11-10  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'fix-iterate' into simplify-lnodes

2013-11-10  Toby Isaac <tisaac@ices.utexas.edu>

	* : iterate: fix edges bug

2013-11-10  Toby Isaac <tisaac@ices.utexas.edu>

	* : small fixes in lnodes

2013-11-06  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes simplification

2013-11-06  Toby Isaac <tisaac@ices.utexas.edu>

	* : iterate: sort intertree inputs, so lowest is always first

2013-11-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : iterate: fix bug in determining cside faces

2013-11-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : cleaned up the control-flow in iterate

2013-11-01  Toby Isaac <tisaac@ices.utexas.edu>

	Merge branch 'test-lnodes' into iterate-ext

2013-11-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : some documentation for the new faces/edges fields of side info
	in p4est_iterate.

2013-11-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added p4est_iterate_ext

2013-10-31  Toby Isaac <tisaac@ices.utexas.edu>

	* : started work on extending iterate  - execute at indirectly
	touched entities - provide more information at corners/edges   this
	should allow lnodes to simplify a lot once it's done

2013-10-31  Toby Isaac <tisaac@ices.utexas.edu>

	* : test of degenerate case of lnodes

2013-10-31  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Move extern C into proper place

2013-10-31  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Edits on comments in p4est_lnodes.h

2012-08-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Remove restrict keywords

2012-08-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Revert to ax_prefix_config.m4

2012-08-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Use the SC_VERSION autoconf macro  Conflicts: 	sc

2013-08-04  Toby Isaac <tisaac@ices.utexas.edu>

	* : comm: added p4est_comm_is_owner  comm: fix to
	p4est_comm_is_owner.

2013-08-05  Toby Isaac <tisaac@ices.utexas.edu>

	* : bits: fixes to the recent neighbor_extra changes.  test_iterate:
	fix corner_neighbor_extra call

2013-08-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : bits: added ncorners to p4est_corner_neighbor_extra

2013-07-31  Toby Isaac <tisaac@ices.utexas.edu>

	* : bits: added nedges arg to edge_neighbor_extra

2013-07-31  Toby Isaac <tisaac@ices.utexas.edu>

	* : bits: added nface argument to face_neighbor_extra

2013-07-31  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Use faster exchange for all levels again

2013-07-31  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Make test_ghost less chatty

2013-07-31  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add test for ghost_exchange_custom_level

2013-07-31  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Implement level-wise ghost_exchange_custom

2013-07-31  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Copy the existing exchange_custom code

2013-07-31  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Extend ghost_exchange interface

2013-07-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : iterate: more strictly protect against duplicates.

2013-07-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : The nodes are no longer needed in mesh

2013-07-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Workaround for pillow connectivity

2013-07-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Address warnings

2013-07-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add another periodic 2D connectivity

2013-07-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Make p4est_mesh work for periodic connectivities

2013-07-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Comment updates

2013-07-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Remove ghost_to_index from p4est_mesh_t

2013-07-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Remove vertex information from mesh

2013-07-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Implement CONNECT_FACE corner neighbors in mesh

2013-07-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Use different mesh adjacencies in example

2013-07-26  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add corner fields to mesh, works for inter-tree

2013-07-26  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add quad_to_tree to p4est_mesh_t

2013-07-26  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Use only P4EST_CONNECT_FACE in ghost

2013-07-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Use P4EST_CONNECT values in tree_boundary

2013-07-26  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add assertions to mesh_face iterator

2013-07-24  Toby Isaac <tisaac@ices.utexas.edu>

	* : connectivity_is_equivalent: compare fields, not bytes.

2013-07-23  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'master' into cbdev  Branch master had two bugfixes


2013-07-23  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'wrap' into cbdev

2013-07-23  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2013-07-23  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix p4est_load with autopartition bug

2013-07-23  Toby Isaac <tisaac@ices.utexas.edu>

	* : complete_or_balance_kernel: fix complete kernel.  When the
	subtree isn't shaped like a square/cube, we need an "end quadrant" q
	so that the completion loop respects the shape of the subtree.  This
	end quadrant was not initialized correctly in the case when the
	input array was length 0: the correct initialization was copied from
	the length > 0 case, and it seems to fix the issue.

2013-07-21  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Doc typos

2013-07-19  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add assertion

2013-07-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add missing WRAP_H defines

2013-07-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Use weighted partition in wrap when needed

2013-07-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Comments and indent on wrap, add member

2013-07-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write wrap_get_ghost and _mesh

2013-07-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote-tracking branch 'ices/ghost2' into cbdev

2013-07-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote-tracking branch 'github/wrap' into cbdev

2013-07-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : The ghost exchange seems to work

2013-07-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write test for ghost exchange

2013-07-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Implement ghost exchange function

2013-07-10  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Require contiguous data for ghost exchange

2013-07-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Populate ghost mirror data

2013-07-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Move p4est_add_ghost_to_buf down in file

2013-07-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Tweak existing ghost code

2013-07-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Remove some waitall statuses

2013-05-31  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Define ghost members and functions for exachange

2013-07-08  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Assertions and flag reset

2013-07-04  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Makeover of p4est_wrap  The user_data field of the p4est
	quadrants is no longer used. Refinement and coarsening is now
	implemented with the new mark_refine and _coarsen functions. The
	wrap_refine function has been renamed to wrap_adapt.

2013-07-03  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Use P4EST_ALLOC instead of SC in wrap

2013-07-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Extend test_coarsen

2013-07-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add callback_orphans parameter to coarsen_ext

2013-07-04  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update refine semantics

2013-07-03  Toby Isaac <tisaac@ices.utexas.edu>

	* : connectivity_is_valid: allow floating corners/edges

2013-07-03  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix warnings

2013-06-04  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update web page

2013-06-04  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'usage' into cbdev

2013-06-04  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge commit 'v0.3.4.1' into cbdev  Conflicts: 	src/p4est_base.h
	(removed comment on size of topidx) 	src/p4est_to_p8est.h
	test/Makefile.am

2013-05-31  Toby Isaac <tisaac@ices.utexas.edu>

	* : connectivity_join_faces: user p8est_child_corner_edges.  I had
	forgot that this array stores the info I was recreating with a for
	loop. Thanks to Daniel Arndt <d.arndt@math.uni-goettingen.de> for
	pointing this out.

2013-05-11  Toby Isaac <tisaac@ices.utexas.edu>

	* : new test: unitcube->rotwrap by join_faces, passes.

2013-05-10  Toby Isaac <tisaac@ices.utexas.edu>

	* : connectivity: added connectivity_is_equivalent.  This will be
	used to test join_faces.

2013-04-22  Toby Isaac <tisaac@ices.utexas.edu>

	* : connect faces: extend to sparser initial connectivity.

2013-04-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : connect_edges, connect_corners: fixed backwards difference

2013-04-03  Toby Isaac <tisaac@ices.utexas.edu>

	* : p4est_connecitivity_join_faces: limited functionality, compiles.


2013-05-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Another edit and updated pdf doc

2013-05-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Some usage edits

2013-05-23  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : First shot at interface document

2013-05-23  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add figures on AMR pipeline

2013-05-23  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Create third figure

2013-05-23  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Work on part A and B images and captions

2013-05-23  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Use tikz trees

2013-05-22  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add two pdf files to docs

2013-05-22  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Create part A figure

2013-05-22  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Start p4est interface howto document

2013-05-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write bug on distributing connectivity in parallel

2013-05-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Assign the no-empty-tree bug to 0.5

2013-05-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Introduce a bug to introduce is_strict_ancestor

2013-05-12  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote branch 'toby/hotfix-balance-bug'

2013-05-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Balance clarifications

2013-05-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote branch 'toby/hotfix-balance-bug'

2013-05-02  Toby Isaac <tisaac@ices.utexas.edu>

	* : balance_response: fix bug causing misbalance.  We want to figure
	out if s is the proper descendant of a local quad, otherwise we want
	the list of quads that overlap s.  This bug caused the routine to
	miss a case where s is a descendant.

2013-05-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Use indent update in sc too

2013-05-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote branch 'toby/indent' into cbdev

2013-05-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote branch 'toby/simplify-range-boundary' into cbdev

2013-05-02  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Include license faq on website

2013-04-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : p4estindent: reenable ./p4estindent file -o outfile usage.

2013-04-29  Toby Isaac <tisaac@ices.utexas.edu>

	* : find_range_boundaries: handle corner cases like the paper

2013-04-05  Toby Isaac <tisaac@ices.utexas.edu>

	* : configure.ac: use ac logging macros

2013-04-05  Toby Isaac <tisaac@ices.utexas.edu>

	* : src/Makefile.am: check before building static libraries

2013-03-08  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add user_long field to a quadrant

2013-03-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : Clean compile, gcc 4.6 -Wall -Wno-unused-function
	-Wno-unused-but-set-variable

2013-03-27  Toby Isaac <tisaac@ices.utexas.edu>

	* : configure.ac: silent make rules, AM_PROG_AR

2013-03-21  Toby Isaac <tisaac@ices.utexas.edu>

	* : p8est_ghost_tree_bsearch -> p8est_ghost_bsearch

2013-04-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Indent

2013-04-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Make p4estindent more robust

2013-02-11  Toby Isaac <tisaac@ices.utexas.edu>

	* : simplify, speed up p4est_quadrant_compare

2013-02-10  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Extend example/tetgen with write programs

2013-02-10  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write connectivity_new_byname

2013-02-10  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Remove example/simple/ptest2

2013-01-18  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Indent

2013-01-18  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add p4est_expand_face_transform

2013-01-18  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update doc subdirectory

2013-01-18  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Comment typos

2013-01-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : Closed balance issues

2013-01-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : doc update for lnodes

2013-01-15  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Indent test_partition2

2013-01-15  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Use new partition_cut functions

2013-01-15  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Change partition cut functions again

2013-01-15  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Comment on a bug

2013-01-15  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Close two bugs

2013-01-15  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'tobin' into cb/pu

2013-01-15  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Comment updates

2013-01-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add two connectivities to p4est_wrap

2013-01-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Remove corners from pillow and the hack define

2013-01-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add 2D connectivities cubed and disk

2013-01-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add assertion

2013-01-03  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Propose cumulative partition cut functions

2013-01-01  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update home page

2013-01-03  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Remove unused variable

2013-01-03  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge remote branch 'toby/new_lnodes'

2012-12-17  Toby Isaac <tisaac@ices.utexas.edu>

	* : Removed unnecessary dependency from lnodes methods

2012-12-17  Toby Isaac <tisaac@ices.utexas.edu>

	* : New, petsc-like lnodes

2012-12-15  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2012-12-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Close a bug

2012-12-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Remove "tree" from ghost search function names

2012-12-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write p4est_ghost_tree_contains

2012-12-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write static p4est_ghost_check_range

2012-12-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add quadrant_is_valid assertion to tree_bsearch

2012-11-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Swap point order in input file

2012-11-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2012-10-17  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added simple test for p4est_replace_t

2012-10-17  Toby Isaac <tisaac@ices.utexas.edu>

	* : Gave up on P4EST_REPLACE_BATCH, added balance_ext

2012-10-16  Toby Isaac <tisaac@ices.utexas.edu>

	* : Started implementing p4est_coarsen_ext

2012-10-16  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added p4est_replace_t, added to refine_ext

2012-10-16  Toby Isaac <tisaac@ices.utexas.edu>

	* : Update libsc

2012-10-13  Toby Isaac <tisaac@ices.utexas.edu>

	* : Replaced old balance algorithms with new balance algorithms

2012-10-13  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fixrd bugs in new balance algorithms, made them default

2012-09-17  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add pillow connectivity and P4EST_PILLOW_HACK

2012-09-17  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add two assertions

2012-09-10  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Simplify get_half_corner_neighbor

2012-09-10  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write p4est_quadrant_half_corner_neighbor

2012-09-10  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Return searched quadrants in p4est_quadrant_exists

2012-09-10  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Narrow ghost layer search by proc and tree

2012-09-10  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add remote proc array to p4est_quadrant_exists

2012-09-07  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Check forest change in wrap_partition

2012-09-07  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Minor cleanup in p4est_wrap

2012-09-07  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Return shipped quadrant count from partition_ext

2012-09-07  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Return changed status from p4est_wrap_refine

2012-08-27  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2012-08-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	Merge branch 'wrap' into cb/pu

2012-08-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Introduce p4est_save_ext

2012-08-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Revert to ax_prefix_config.m4

2012-08-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Remove restrict keywords

2012-08-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Use the SC_VERSION autoconf macro

2012-08-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Comment on bug report

2012-08-13  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Test autopartition feature of p4est_load_ext

2012-08-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Indent

2012-08-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Tweak test_loadsave

2012-07-15  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write p4est_load_ext for new file format

2012-07-15  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Partition-independent p4est_save format

2012-04-27  Toby Isaac <tisaac@ices.utexas.edu>

	* : Lint error.

2012-07-15  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Indent on p4est_io

2012-06-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write p4est_inflate and test in loadsave

2012-08-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix bug in connectivity_is_equal

2012-07-17  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Correct variable name

2012-07-18  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Enable some canned connectivities in wrap

2012-07-18  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Remove wrap_init and _finalize, add mpicomm

2012-06-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Indicate which ghost and mesh match wrap->p4est

2012-06-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Align print statement with py4est

2012-06-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add wrap_complete to clean up after AMR cycle

2012-06-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Enhance wrap_partition for AMR pipeline

2012-06-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add refine coarsen balance wrapper

2012-06-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add flags, intermediate mesh and ghost to wrap

2012-06-08  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Wrap p4est_partition

2012-06-08  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Wrap sc/p4est_init and sc_finalize

2012-06-07  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : First show at (possible python) wrapping

2012-06-19  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add some p4est_base macros

2012-06-19  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix nonsense cast

2012-06-19  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fix up p8est_deflate_quadrants declaration

2012-06-19  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Fixes for C++ compile

2012-06-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Comment updates

2012-06-03  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Start p4est_io with p4est_deflate_quadrants

2012-06-03  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Change data size to 0 in test_loadsave2

2012-05-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add connectivity asserts

2012-04-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add count_pertree to test_partition

2012-04-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add count_pertree to test_comm

2012-04-25  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write p4est_comm_count_pertree

2012-04-18  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Small comment updates

2012-04-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Properly expose new connectivity load/save api

2012-04-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Catch return value in read_conn2

2012-04-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Use connectivity_source in connectivity_load

2012-04-16  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write connectivity_source and connectivity_inflate

2012-04-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write simple connectivity read program

2012-04-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Draw functions Tij

2012-04-11  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Extend documentation

2012-04-10  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write a connectivity doc file

2012-04-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Follow sc_io rename

2012-04-09  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Give connectivity_save a return value

2012-04-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Write connectivity_sink and _deflate

2012-04-05  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Clean C++ compile

2012-03-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update .gitmodules to new public libsc location

2012-03-29  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Update libsc

2012-03-28  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added p4est_connectivity_permute

2012-01-16  Toby Isaac <tisaac@ices.utexas.edu>

	* : Updated to using metis 5 API in connectivity reorder.

2011-10-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Need defines for C++ not typedefs

2011-10-28  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Remove backwards files and use P4EST_STRICT_API

2011-10-14  Carsten Burstedde <burstedde@ins.uni-bonn.de>

	* : Add backwards compatibility files

2011-09-28  Toby Isaac <tisaac@ices.utexas.edu>

	* : balance_kernel: fixed errors related to first_desc/last_desc

2011-09-27  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fixed some errors related to balance.

2011-09-27  Toby Isaac <tisaac@ices.utexas.edu>

	* : Enable loading from smaller processor count

2011-09-23  Toby Isaac <tisaac@ices.utexas.edu>

	* : Changed ifdef that pgi preprocessor dislikes.

2011-08-22  Toby Isaac <tisaac@ices.utexas.edu>

	* : Changed balance_test to balance_seeds to align with paper

2011-08-10  Toby Isaac <tisaac@ices.utexas.edu>

	* : p4est_balance: found simplified version of last kernel

2011-08-09  Toby Isaac <tisaac@ices.utexas.edu>

	* : balance_test: fixed one error, simplified a kernel

2011-08-08  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fixed bad assertions in p4est_complete_or_balance

2011-07-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add bug to store only non-empty trees

2011-07-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add max-ranges option to timings

2011-07-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add inspect->balance_max_ranges variable

2011-07-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Tweaks

2011-07-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add inspection of zero sends/receives in balance

2011-07-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Complete ranges-notify verification loop

2011-07-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Change balance to use sc_notify by default

2011-07-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Split range decoding off recv and send loops

2011-07-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Improve option handling in timings

2011-07-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add notify options to timings example

2011-07-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Start using sc_ranges_decode

2011-07-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add inspect support for ranges and notify

2011-07-27  Toby Isaac <tisaac@ices.utexas.edu>

	* : Further simplified new balance kernel

2011-07-27  Toby Isaac <tisaac@ices.utexas.edu>

	* : Cleaned up complete_or_balance{_new_kernel}

2011-07-22  Toby Isaac <tisaac@ices.utexas.edu>

	* : Save while checking checksum problem.

2011-07-24  Carsten Burstedde <carsten@ices.utexas.edu>

	Merge balance modifications

2011-07-15  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc

2011-07-19  Toby Isaac <tisaac@ices.utexas.edu>

	* : Made complete_or_balance_new more logical

2011-07-19  Toby Isaac <tisaac@ices.utexas.edu>

	* : One small change to old complete_or_balance to make it more
	competitive.

2011-07-17  Toby Isaac <tisaac@ices.utexas.edu>

	* : Small change to balance_new_kernel: cautious.

2011-07-17  Toby Isaac <tisaac@ices.utexas.edu>

	* : Made p4est->inspect nonowned

2011-07-17  Toby Isaac <tisaac@ices.utexas.edu>

	* : Made new changes work with c++ compiler

2011-07-08  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Complete test for complete

2011-07-13  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix edge and corner redundancy in complete

2011-07-13  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Assertions and rearrangement

2011-07-11  Toby Isaac <tisaac@ices.utexas.edu>

	* : Spped optimizations for new balance algorithms

2011-07-11  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fixed a bug in balance_border

2011-07-11  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added balance breakdown to timings

2011-07-10  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fixed an error in compute_overlap_internal, added logging.

2011-07-10  Toby Isaac <tisaac@ices.utexas.edu>

	* : Saving progress on send_second optimization

2011-07-10  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added p4est_complete_or_balance_new

2011-07-09  Toby Isaac <tisaac@ices.utexas.edu>

	* : Spun off core of balance_borders as new kernel

2011-07-08  Toby Isaac <tisaac@ices.utexas.edu>

	* : p4est_balance_borders passes first test

2010-07-12  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added overlap/disjoint comparison operations.

2011-07-06  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added p4est_inspect to choose between algorithms.

2011-07-06  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added compute_overlap_new

2011-07-06  Toby Isaac <tisaac@ices.utexas.edu>

	* : internal changes in p4est_balance

2011-07-06  Toby Isaac <tisaac@ices.utexas.edu>

	* : type change in p4est_balance.c

2011-07-06  Toby Isaac <tisaac@ices.utexas.edu>

	* : Made test_balance_test shorter

2011-07-06  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fixed errors if update p4est_balance routines

2011-07-05  Toby Isaac <tisaac@ices.utexas.edu>

	* : First verifications passed for new balance kernels

2011-07-05  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added kernels to p4est_balance.c

2011-07-05  Toby Isaac <tisaac@ices.utexas.edu>

	* : Make BALANCE->CONNECT change in p4est_balance

2011-02-07  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added balance_test example

2011-02-07  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added p4est_balance_test

2011-02-04  Toby Isaac <tisaac@ices.utexas.edu>

	* : First version of balance_test concept.

2011-07-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Be conservative and null-terminate strings

2011-07-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Include package string and attributes in save

2011-07-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Compare attributes in connectivity_is_equal

2011-07-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Read tet attributes into connectivity

2011-07-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add tree_to_tag field to connectivity

2011-06-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Output edge and corner numbers in new_tets

2011-06-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Move connectivity_complete further down

2011-06-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Write corner identification in connectivity_complete

2011-06-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Refactor find_corner_transform

2011-06-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add test_conn_complete

2011-06-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove redundant edges from connectivity_complete

2011-06-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Refactor find_edge_transform

2011-06-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update documentation on connectivity_complete

2011-06-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix edges in connectivity_complete

2011-06-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove corner information and take any input

2011-06-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Start work on edge completion

2011-06-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Complete connectivity across faces

2011-06-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Move p4est_topidx functions into p4est_base

2011-06-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Move connectivity_complete where it belongs

2011-06-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Call connectivity_complete after cleaning up

2011-06-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Whitespace

2011-06-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Write p4est_topidx_hash functions

2011-06-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Make read_tetgen write p8c and vis files

2011-06-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Create valid but isolated connectivity from tets

2011-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Make some functions inline and simplify

2011-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Write p8est_tets_connectivity_new_vertices

2011-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Rename const fields and move key functions

2011-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Convert p8est_tets_identify_faces to hash_array

2011-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add unique tetrahedron edges

2011-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Write p8est_tets_identify_faces

2011-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add tet edge and face keys

2011-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add stub for connectivity_new_tets

2011-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Rename to p8est_tets

2011-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Change name to p8est_tet_flip

2011-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Use p4est_topidx_t in p8est_tets_hexes

2011-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Make tetrahedra righthanded

2011-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Implement reading of node and element data

2011-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Start files to read tetgen node and ele output

2011-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Install tetgen data files

2011-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Rename tetgen output files

2011-06-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add output files from tetgen

2011-06-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Make p4est_new less chatty with many trees

2011-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc

2011-06-08  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc

2011-06-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Compile with -ansi

2011-06-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update homepage

2011-06-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix warning

2011-05-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Make user_date survive p4est_copy when data_size 0

2011-05-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Indent

2011-05-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Introduce sc_array_position

2011-05-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove override load and save

2011-05-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc

2011-05-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Shortcut mesh binary search for same tree

2011-05-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Indent

2011-05-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Expose full face encoding in face_neighbor

2011-05-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add another variant of face_neighbor_iterator_init

2011-05-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add nquad and nrank to face neighbor API

2011-05-18  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add quadrant_id as output to quadrant_cumulative

2011-05-18  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Write p4est_mesh_face_neighor iterator

2011-05-18  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Write and test p4est_quadrant_ancestor

2011-05-18  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove unnecessary const

2011-05-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add the option for user data of type int

2011-05-18  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix define in p8est_mesh

2011-05-11  Toby Isaac <tisaac@ices.utexas.edu>

	* : Changed the connectivity_reorder API

2011-05-11  Toby Isaac <tisaac@ices.utexas.edu>

	* : Changes balance_type to connect_type

2011-05-11  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fixed some mistakes in metis inclusion

2011-04-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added metis reordering

2011-04-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Warning and minor indentation

2011-04-22  Johann Rudi <johann@ices.utexas.edu>

	* : Extend test_partition_corr: Run test for forest with one tree,
	too

2011-04-22  Johann Rudi <johann@ices.utexas.edu>

	* : Fix a bug in p4est_partition_for_coarsening: MPI error when
	applied to forest with one tree and one quadrant

2011-04-21  Johann Rudi <johann@ices.utexas.edu>

	* : Extend test: Apply partition with coarsening correction on trees
	with one quadrant

2011-04-21  Johann Rudi <johann@ices.utexas.edu>

	* : Fix a bug in p4est_partition_for_coarsening: Assert() when
	applied to tree with one quadrant

2011-04-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc

2011-04-09  Toby Isaac <tisaac@ices.utexas.edu>

	* : Made brick more efficient for high aspect ratios

2011-04-08  Toby Isaac <tisaac@ices.utexas.edu>

	* : Removed a bad short circuit from p4est_lnodes

2011-03-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Comment fix

2011-03-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add "b" modifier to fopen

2011-03-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix iterate docs

2011-03-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Complete comments in p48est_mesh.h

2011-03-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add non-unique vertex numbers and coordinates

2011-03-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Extend mesh example to 3D

2011-03-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add adapted test and memory usage to mesh2

2011-03-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add p4est_mesh_memory_used function

2011-03-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Write mesh construction for hanging neighbors

2011-03-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Turn quad_to_half into an array

2011-03-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add test for uniform meshes to example/mesh

2011-03-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Always test for uninitialized quads/faces

2011-03-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add face neighborhood for same-size quadrants

2011-03-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Start iterating, catch boundary faces

2011-03-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Comment additions

2011-03-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Include fixes

2011-03-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Start 2D mesh example program

2011-03-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Populate mesh members and fill ghost information

2011-03-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove "mesh" prefix from simple/second vtk

2011-03-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Start defining 3D face connectivity

2011-03-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Start p4est_mesh files

2011-03-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove visit file on clean

2011-03-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Write visit master file

2011-03-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Whitespace in p4est_vtk.c

2011-02-21  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc

2011-02-11  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update home page

2011-02-10  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Close bug on qcoord_to_vertex and childrenpv

2011-02-10  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove redundancy on children and add childrenpv

2011-02-10  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove redundancy on is_family variants

2011-02-10  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Close bug on 2D brick

2011-02-09  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update home page with acceptance of paper

2011-01-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Clarify some comments

2011-01-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix warnings in lnodes

2011-02-09  Carsten Burstedde <carsten@ices.utexas.edu>

	* : The new ghost layer has been fixed

2011-02-08  Toby Isaac <tisaac@ices.utexas.edu>

	* : Update libsc

2011-02-07  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added some doc to p8est_quadrant_shift_edge

2011-02-07  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added warning to p4est_tree_compute_overlap

2011-02-07  Toby Isaac <tisaac@ices.utexas.edu>

	* : Proposed solution to balance bug.

2011-01-27  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fixed a bug in p4est_ghost UNBALANCED_ALLOW

2011-02-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Make p4est_nodes_local work for unbalanced forest

2011-02-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc

2011-01-14  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add NSF acknowledgements and disclaimer

2010-12-13  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Turn README into a useful and readable document

2010-11-12  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Revert to old ghost layer for now

2010-11-11  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added some asserts to p4est_lnodes for debugging.

2010-11-10  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc

2010-11-09  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove another shadow

2010-11-09  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove some shadowed declarations

2010-11-09  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Clarify documentation

2010-10-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update p4est-setup script

2010-10-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update p4est homepage

2010-10-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Output quadrant size in timings

2010-10-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc

2010-10-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Commit p4est web page

2010-10-12  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update sc

2010-10-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Change return type of partition_correction

2010-10-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Change names and return type for partition helpers

2010-10-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add extern C macros to p4est_extended.h

2010-10-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Implement partition_ext in favor of static globals

2010-10-04  Carsten Burstedde <carsten@ices.utexas.edu>

	Merge partition for coarsening

2010-10-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update documentation on p4est_new

2010-10-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Start separate header file for the _ext functions

2010-10-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Introduce a static global as pre-partition switch

2010-10-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Make p4est_correct_partition static

2010-10-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Move comments and indent

2010-10-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Expose 2D and 3D functions separately

2010-10-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Whitespace changes

2010-10-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add Johann as author

2010-09-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Use 2D brick in timings/bricks

2010-09-30  Carsten Burstedde <carsten@ices.utexas.edu>

	Merge 2D brick connectivity

2010-09-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : Combined 2d and 3d brick tests.

2010-09-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : Combined 2d and 3d brick code

2010-09-29  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added 2d brick connectivity.

2010-09-29  Toby Isaac <tisaac@ices.utexas.edu>

	* : Removed stray author comments that are no longer necessary.

2010-09-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add timings for loaded connectivity

2010-09-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add periodicity switch to brick timings

2010-09-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Prepare brick timings

2010-09-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Start brick timing example and add 2D brick bug

2010-09-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Close two bugs and unassign one

2010-09-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add note on buggy parallel sort

2010-09-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add comments on obsolete geometry scheme

2010-09-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Simplify p4est_new API

2010-09-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : Attempt to fix ghost layer problem.

2010-08-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add program that triggers assertion in ghost_new

2010-09-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc

2010-07-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc

2010-07-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Simplify MPI configure logic

2010-07-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Change identification log message

2010-07-27  Johann Rudi <johann@ices.utexas.edu>

	* : Fixed: possible infinite loop

2010-07-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix 2D version of qcoord_to_vertex.

2010-07-18  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc.

2010-07-10  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc.

2010-07-09  Johann Rudi <johann@ices.utexas.edu>

	* : Create test for partition correction

2010-07-09  Johann Rudi <johann@ices.utexas.edu>

	* : Create separate method for partition correction.

2010-07-07  Johann Rudi <johann@nordend.ices.utexas.edu>

	* : Correct partition where quadrants of one family are distributed
	over multiple processes. - correction does not take weight into
	account - commented "printf"s still in code

2010-07-07  Johann Rudi <johann@nordend.ices.utexas.edu>

	* : Add help functions for correcting partition where quadrants of
	one family are distributed over multiple processes.

2010-07-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add release to 0.3 for ditz.

2010-07-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Close two more bugs.

2010-07-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Close two bug reports.

2010-07-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Assertions and a warning in ghost.

2010-07-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add size calculation to test_valid.

2010-07-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Write p4est_ghost_memory_used.

2010-07-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add mpisize and num_trees to ghost structure.

2010-07-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Compute forest sizes in sieve example.

2010-07-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Write memory_used functions for connectivity and forest.

2010-06-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Minor changes to partition_given.

2010-06-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Whitespace changes.

2010-06-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add an additional test for partition.

2010-06-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Reorder variable declarations, use tree variable.

2010-06-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add properly casted ones.

2010-06-14  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Start sieve example.

2010-06-11  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add license approval document.

2010-05-17  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add notice on programs under config.

2010-05-17  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update to officially licensed version of libsc.

2010-05-17  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove files that already reside in sc.

2010-05-17  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove more unnecessary files.

2010-05-17  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove leftover README.p4t.

2010-05-12  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove code related to p4est_file.

2010-05-12  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Call it just p4est, not library.

2010-05-12  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Use official GPL 2 license stub in example.

2010-05-12  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Use official GPL 2 license stub in test.

2010-05-12  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Use official GPL 2 license stub in src.

2010-05-12  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Use official UT copyright in toplevel directory.

2010-05-11  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Make p4est_ghost compile without MPI.

2010-05-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Use ghost checksum in test_valid and timings.

2010-05-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Write parallel checksum for ghost layer.

2010-05-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Separate parallel checksum function.

2010-05-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Whitespace.

2010-03-03  Toby Isaac <tisaac@ices.utexas.edu>

	* : Merge new and old ghost routines.

2009-12-12  Toby Isaac <tisaac@ices.utexas.edu>

	* : Changed ghost_new's internal workings.  1) The change makes
	ghost_new faster, because there are fewer calls to comm_find_owner.
	2) The change allows a ghost layer to be created regardless of how
	balanced the forest is.

2010-05-06  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Relax requirements on data_size in save/load.

2010-05-06  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Expose connectivity_new_copy to the API.

2010-05-06  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc for openmpi fix.

2010-04-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add to p4est_save docs (thx Wolfgang).

2010-04-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Extern C fixes.

2010-04-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add feature request.

2010-04-06  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix spelling descendent/descendant.

2010-04-06  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Prepare extended refinement callback.

2010-03-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Change some asserts and whitespace.

2010-03-18  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc.

2010-03-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Use WITH and ENABLE in automake conditionals.

2010-03-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc.

2010-03-14  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc.

2010-03-12  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Pull in latest libsc.

2010-03-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add verification code for edge transformation.

2010-03-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Put the code from the paper in for face_transform.

2010-03-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Weighted partition is correct, remove bug.

2010-03-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Simplify coarsen algorithm to version in paper.

2010-03-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Enable forest comparison with unequal data size.

2010-03-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Copy coarsen function into test_coarsen as coarsen_old.

2010-03-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update test_coarsen.

2010-03-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Use search_lower_bound function now in libsc.

2010-02-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Address warnings and use new libsc.

2010-02-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add bug on weighted partition.

2010-01-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Unassign all 0.3 bugs.

2010-01-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Make fast version log essential in p4est-setup.sh.

2010-01-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add log level ESSENTIAL.

2009-12-12  Toby Isaac <tisaac@ices.utexas.edu>

	* : Use resize instead of push in neighbor_extra routines.

2009-11-21  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add shell and sphere to simple example.

2009-12-08  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fixed a bug in lnodes sharer creation.

2009-12-08  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix broken p4est_qcoord_to_vertex.

2009-12-08  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc.

2009-12-08  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Pass forest index of leaf quadrant in p4est_search.

2009-12-08  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Make lint not worry about log functions.

2009-11-11  Toby Isaac <tisaac@ices.utexas.edu>

	* : Changed the lnodes_code standard to match the standard in
	mangll.

2009-12-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Make public function connectivity_new_brick use int.

2009-12-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Change trilinear pid type and compute pids in _nodes.

2009-12-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Use updated libsc.

2009-11-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove unused include directive.

2009-11-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Write recursive search for multiple generic "points".

2009-11-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Move several functions into new p4est_search files.

2009-11-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Use updated libsc.

2009-11-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Shortcut global comm in p4est_new for level 0.

2009-11-21  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Clean up leftover CFLAGS check in p4est-setup.

2009-11-21  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Whitespace/comments on p4est-setup.

2009-11-21  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Disable binary VTK compression in p4est-setup-DEBUG.

2009-11-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove leftover array_topidx.

2009-11-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Avoid sending balance quadrants to empty processors.

2009-11-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add MPI barrier before first timing.

2009-11-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Use ERROR log level from libsc.

2009-11-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Pull in libsc with updated abort.

2009-11-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Pull in libsc with updated logging.

2009-11-14  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix warnings.

2009-11-13  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Use minlevel and uniform creation in timings.

2009-11-13  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix comment on complete_region.

2009-11-13  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Optimize away global comm in uniform forest creation.

2009-11-13  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Enable uniform refinement on forest creation.

2009-11-13  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Enable minimum level on forest creation.

2009-11-13  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Prepare API for p4est_new_ext.

2009-11-03  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added share_owned test to test_lnodes.

2009-11-03  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fixed error in p4est_lnodes_rank_t creation.

2009-11-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Close bug on neighborhood structure (we have the iterator).

2009-11-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove ifdef inside macro (PGI complains).

2009-11-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Warnings and whitespace.

2009-11-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : Cosmetic changes in lnodes.

2009-11-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : element-to-global node map testing in test_lnodes.

2009-11-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fixed lnodes errors.  Before this commit, there was a problem
	with the element-to-global node maps for degree >= 3.  Also, there
	was an unneccessary assert for share_all and a bad free forjO
	buffer_destroy.

2009-10-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add quadrant coordinate to vertex space interpolation.

2009-10-29  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fixed a bug in p4est_lnodes_decode (2d only).

2009-10-27  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added lnodes_code_t type.

2009-10-27  Toby Isaac <tisaac@ices.utexas.edu>

	* : Grouped int8_t in iterate structs.

2009-10-28  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fix C++ compiler errors.

2009-10-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Avoid potential bool-related bug.

2009-10-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Some comment edits.

2009-10-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Disable blas in p4est_setup script.

2009-10-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Check for BLAS in configure since libsc calls it.

2009-10-21  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Reenable library dependencies.

2009-10-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix memory inconsistency for no-mpi and tweak a test.

2009-10-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix output array type in range_boundaries.

2009-10-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix warnings.

2009-10-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Use P4EST_VERBOSEF instead of printf in test.

2009-10-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Use unsigned long long for size_t as of coding_standards.

2009-10-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Isolate p8est_trilinear_nodes.c file.

2009-10-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added array_index function for lnodes_rank.

2009-10-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added array_index functions for iterate.

2009-10-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : Removed shell test from p8est_test_iterate.  I'm fairly
	confident in the iterate mechanism now, and this test was taking a
	lot of time.

2009-10-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : p8est_lmesh_trilinear -> p8est_trilinear_lnodes

2009-10-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added global_owned_count field to lnodes.

2009-10-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : Combined trilinear and lmesh_trilinear under one header.

2009-10-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : Change lnodes_share format.

2009-10-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : Return true/false terminology to some comments.

2009-10-13  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fix bugs in lnodes sharers.

2009-10-13  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added p8est_lmesh_trilinear.

2009-09-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fix p4est_lnodes_decode declaration.

2009-10-08  Toby Isaac <tisaac@ices.utexas.edu>

	* : Add lnodes_comm, make lnodes_share routines uniform.

2009-10-03  Toby Isaac <tisaac@ices.utexas.edu>

	* : Switch % 2 to & 1 thoughout code.

2009-10-03  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fix error in lnodes_code_fix.

2009-10-03  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fixed lint warnings in lnodes.

2009-10-03  Toby Isaac <tisaac@ices.utexas.edu>

	* : smallest_corner_descendent becomes quadrant_corner_descendent

2009-09-14  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added lnodes_share routines.

2009-09-10  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added smallest_corner_descendent function.

2009-09-09  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added lnodes to timings.

2009-09-09  Toby Isaac <tisaac@ices.utexas.edu>

	* : lnodes: changed communication order.

2009-09-09  Toby Isaac <tisaac@ices.utexas.edu>

	* : Make lnodes conform with 2dz, ghost API, C++.

2009-09-09  Toby Isaac <tisaac@ices.utexas.edu>

	* : iterate: precompute when to run intra-tree iter.

2009-09-09  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added find_range_boundaries function.

2009-09-06  Toby Isaac <tisaac@ices.utexas.edu>

	* : Make iterate conform with 2dz, ghost API, C++.

2009-10-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove removed files and dirs from AUTHORS.

2009-10-13  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Enable optional dynamic linking.

2009-10-14  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Polish coding standards.

2009-10-13  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update bugs and todos.

2009-10-13  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add two periodic cubes connectivity.

2009-10-13  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Unify logging of checksums.

2009-10-12  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add p4est-setup script to aid standalone p4est installation.

2009-10-12  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Test no-vertices in test_loadsave2 too and close bug.

2009-10-12  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix more warnings.

2009-10-09  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix lint warnings.

2009-10-09  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove obsolete init_logging function.

2009-10-06  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix p4est to p8est in p8est_ghost.h.

2009-10-06  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Change p8est_ to p4est in some .c files for uniformity.

2009-10-06  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Make p4est compile with a C++ compiler.

2009-09-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add missing static to p4est_nodes_new_local.

2009-09-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove bool from p4est.

2009-09-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove boolean comparisons.

2009-09-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Strenghten an assertion.

2009-10-01  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Non-functional edits on p4est_to_p8est.h.

2009-08-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update copyright year.

2009-08-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Change 2D vtk files to z-order.

2009-08-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove p4est_file and read_forest from Makefile.

2009-08-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Change 2D nodes to z-order.

2009-08-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Change 2D ghost files to z-order.

2009-08-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove remaining right-hand-rule logic from connectivity.

2009-08-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Change 2D algorithms to z-order.

2009-08-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Change 2D p4est files to z-order.

2009-08-21  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Change 2D communication files to z-order.

2009-08-21  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Use usual 2D/3D logic for children.

2009-08-21  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Change 2D bits files to z-order.

2009-08-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Realize 2D periodic-rotwrap rename in example, test.

2009-08-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Change 2D connectivity files to z-order.

2009-08-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix 2D/3D conditional build in example/points.

2009-08-14  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Use ghost_tree_bsearch in quadrant_exists functions.

2009-08-14  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add tree-specific binary search function for ghost layer.

2009-08-14  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update some copyright dates.

2009-08-14  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Change ghost layer API.

2009-09-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : Use recycle array for cdp and edp.

2009-08-31  Toby Isaac <tisaac@ices.utexas.edu>

	* : Additional documentation for lnodes.

2009-08-31  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fixed lint warnings.

2009-08-31  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added log print statements to lnodes.

2009-08-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : Cosmetic changes to lnodes.

2009-08-28  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added face_code fix to lnodes.

2009-08-28  Toby Isaac <tisaac@ices.utexas.edu>

	* : Build global_nodes and sharers in lnodes.

2009-08-27  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added actual node pass to lnodes.

2009-08-27  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added communication test to lnodes.

2009-08-26  Toby Isaac <tisaac@ices.utexas.edu>

	* : Take advantage of intra_tree flag in lnodes.

2009-08-25  Toby Isaac <tisaac@ices.utexas.edu>

	* : Initial lnodes development.

2009-09-05  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added shortcut to skip non-local trees in iterate.

2009-08-25  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added intra_tree flag to iterate callbacks.

2009-08-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : Documentation in iterate.

2009-08-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : iterate: pull computations out of loops, pull volume loop out of
	main function.

2009-08-19  Toby Isaac <tisaac@ices.utexas.edu>

	* : Change iter_*_args to be more modular.

2009-08-18  Toby Isaac <tisaac@ices.utexas.edu>

	* : Enable ghost-free iterate, fix test_iterate to match.

2009-08-17  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fixed lint warnings.

2009-08-17  Toby Isaac <tisaac@ices.utexas.edu>

	* : Update interface for iter_volume_info_t.

2009-08-17  Toby Isaac <tisaac@ices.utexas.edu>

	* : Update interface for iter_corner_info_t.

2009-08-15  Toby Isaac <tisaac@ices.utexas.edu>

	* : Updated interface for iter_edge_info_t.

2009-08-14  Toby Isaac <tisaac@ices.utexas.edu>

	* : Begun process of replacing iter_*_info types.

2009-08-14  Toby Isaac <tisaac@ices.utexas.edu>

	* : Use sc_split_array for ghost layer.

2009-08-13  Toby Isaac <tisaac@ices.utexas.edu>

	* : Use sc_split_array.

2009-08-13  Toby Isaac <tisaac@ices.utexas.edu>

	* : Modified the behavior of face_neighbor_extra.

2009-07-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : Initial search hashing in iterate.

2009-07-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fixed a bug in the split_array loop.

2009-07-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : Speedups for corner_iterate.

2009-07-27  Toby Isaac <tisaac@ices.utexas.edu>

	* : Make test_iterate call *_neighbor_extra.

2009-07-27  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added *_neighbor_extra functions.

2009-07-22  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added short-circuit for empty trees in iterate.

2009-07-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added completeness check to test_iterate.

2009-07-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added volume_iterate for volume-only degenerate case.

2009-07-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : Comments for p4est_iterate.

2009-07-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : Comments for face_iterate.

2009-07-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : Comments for edge_iterate.

2009-07-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : Documentation of corner_iterate.

2009-07-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : Doc. in p4est_iterate on allocation sizes.

2009-07-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : Updated view handling in p4est_iterate.

2009-07-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : Cleaned up declarations in p4est_iterate.

2009-07-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : Changed loop to divide ghost_layer in iterate.

2009-07-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : p4est_to_p8est: - unnecessary, + ancestor_id.

2009-07-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : Modified split_array loop and comments.

2009-07-20  Toby Isaac <tisaac@ices.utexas.edu>

	* : Make child_id call ancestor_id.

2009-07-08  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Some editorial changes.

2009-06-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : Documentation in iterate.h.

2009-06-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : iter_*_info_t naming conventions updated:  tree_local_num   ->
	quadids tree             -> treeids corner_in_zorder -> corners
	edge_in_zorder   -> edges common_corner    -> common_corners
	hanging_flag     -> is_hanging

2009-06-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : Iterator naming conventions updated:  iterator->iterate
	qcb->iter_volume fcb->iter_face ecb->iter_edge vcb->iter_corner

2009-06-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : Name change higher_child_id -> ancestor_id

2009-06-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fixed lint warnings in iterator and test_iterator.

2009-06-30  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fixed lint warnings in split_array, higher_child_id

2009-06-29  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fixed when iterator would skip some edges and faces.

2009-06-29  Toby Isaac <tisaac@ices.utexas.edu>

	* : Cleaned up and simplified test_iterator, fixed warnings in
	iterator.

2009-06-29  Toby Isaac <tisaac@ices.utexas.edu>

	* : Modified base case for vert_iterator.

2009-06-29  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added vert_iterator.

2009-06-29  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added p4est_corner_faces.

2009-06-29  Toby Isaac <tisaac@ices.utexas.edu>

	* : Proper handling of outside faces in iterator.

2009-06-29  Toby Isaac <tisaac@ices.utexas.edu>

	* : Tree edge iteration.

2009-06-29  Toby Isaac <tisaac@ices.utexas.edu>

	* : Initial iterator development.

2009-06-29  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added iterator.h files.

2009-06-29  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added p4est_face_corners and rface_to_zface.

2009-06-29  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added split_array and higher_child_id.

2009-08-14  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Rename p4est_mesh to _nodes and remove _neighborhood.

2009-08-11  Toby Isaac <tisaac@ices.utexas.edu>

	* : Fixed behavior of comm_neighborhood_owned.

2009-08-12  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update docs and bugs on ghost layer.

2009-08-12  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Use updates sc_flops and sc_stats in p4est_timings.

2009-08-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc.

2009-08-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove EOF comments from .c files.

2009-08-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc.

2009-08-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc and adapt to sc_stats rename.

2009-08-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc.

2009-08-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc.

2009-07-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Squish some warnings.

2009-07-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Make LOGF macro nicer.

2009-07-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix some warnings.

2009-07-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Adapt to updated sc_abort related macros.

2009-07-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Have p4est_new log the local quadrant minimum.

2009-07-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Adapt to libsc logging changes.

2009-07-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Bump libsc for trace file changes.

2009-07-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Some logging adjustments.

2009-07-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Bump libsc.

2009-07-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Make output prefix a command line option.

2009-07-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add timing statistics to test_loadsave.

2009-07-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Make refinement level optional in test_loadsave.

2009-07-08  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update bug database.

2009-06-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Change lnode sharers to be more numerically friendly.

2009-06-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Propose base_5 encoding of hanging faces.

2009-06-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Turn do while macros into expressions.

2009-06-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix integer warnings.

2009-06-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix compiler warnings on lnodes prototypes.

2009-06-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Simplify Lobatto node storage.

2009-06-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Lay out Lobatto node interface.

2009-06-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Bump the number of finite difference geometry tests.

2009-06-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc.

2009-05-13  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Rename inverse reference geometry trafo I to R.

2009-05-01  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added copyright and author information.

2009-05-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : dates, copyright info.

2009-05-01  Toby Isaac <tisaac@ices.utexas.edu>

	* : bug fixes in brick, lint correctness.

2009-04-28  Toby Isaac <tisaac@ices.utexas.edu>

	* : Added brick connectivity, with brick specific test.

2009-04-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Updated libsc with fixed lint warnings.

2009-04-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc.

2009-04-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Pull in libsc test for NaN array.

2009-04-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Clarify computational domain comments.

2009-03-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update to current sc without --enable-realloc.

2009-03-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add CMB grading to p8est_geometry_shell.

2009-03-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add name field to geometry information.

2009-03-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Introduce inverse geometry interations.

2009-03-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Use SC_EPS defines in geometry.

2009-03-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Change naming for geometry coordinate systems.

2009-03-23  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Update libsc.

2009-03-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Pull in lint fix in current libsc.

2009-03-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix spherical Jacobian computations.

2009-03-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add finite difference test for Jacobians.

2009-03-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Activate sphere and XYZD computation to geometry example.

2009-03-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote D and J transformations for the sphere.

2009-03-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Write X transform for the sphere.

2009-03-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Prepare geometric transformation for the sphere.

2009-03-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove corners from sphere since they are redundant.

2009-03-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Correct edge flips for sphere and add corner information.

2009-03-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added edge information to connectivity_sphere.

2009-03-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Start connectivity_new_sphere.

2009-03-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added a refinement function to geometry example.

2009-03-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Use vtk_write_all in geometry example.

2009-03-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add vtk_write_all convenience functions and write_vector dummy.


2009-03-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Copied vtk_write_point_scalar from mangll, some adaptations.

2009-03-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Start example that uses geometry transformations for VTK output.


2009-03-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Activate geometry transform in 3D VTK routine.

2009-03-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add geometry argument to VTK api.

2009-03-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Set up geometry transformation for the shell.

2009-03-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Started files for geometric transformation.

2009-03-17  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Documentation fixes.

2009-03-17  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add bug on callback extension for coarsening and refinement.

2009-03-17  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc.

2009-03-11  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Close bug on vertex-free corner connectivity.

2009-03-11  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Lint fix on test_periodic3.

2009-03-11  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add test for periodic tree with flipped edge and extra corners.


2009-03-10  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Write test for periodic connectivities.

2009-03-10  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Make edge connectivity work with anti-face flip.

2009-03-10  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove dependency on vertices from p4est.

2009-03-09  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Rewrite corner transforms in a vertex-free way.

2009-03-09  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Replace edge_face_corners function with lookup table, add test.


2009-03-09  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Reverse engineered the 3D face transform for fast computation.

2009-03-09  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add test to prepare precomputation of 3D face transforms.

2009-03-09  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Check P4EST_BUILD_2D conditional in example Makefile.am.

2009-02-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add one long summary line to timings example and fix typo.

2009-02-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add shell connectivity to p8est_timings.

2009-02-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add bug on minor documentation fix.

2009-02-18  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update libsc.

2009-02-18  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Update to contents of trilinear_mesh_types.h file.

2009-02-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Always allocate and zero out elem_pids and node_pids.

2009-02-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Adapted to change in trilinear_mesh structure.

2009-02-13  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Use P4EST_SC_LDADD variable for library dependency tracking.

2009-02-12  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added git2cl to dist and commented on configure.ac.

2009-02-12  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Forgotten to add git2cl to distribution.

2009-02-12  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove checks that are done from within libsc.

2009-02-12  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Integrate current libsc: lots of configure changes.

2009-02-12  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove LINK variable from configure.

2009-02-11  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add bugs on neighborhood generation and overlapping ghost layer.


2009-02-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added several p4est bug reports.

2009-01-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Removed configure options in p4est and sc, fixed stats
	assertion.

2009-01-13  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Updated to libsc now with array views.

2008-11-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Split receive array into its two parts.

2008-11-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Sort the balance reply array tree first.

2008-11-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added p4est_quadrant_is_equal_piggy function.

2008-11-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Completely removed MPI_COMM_NULL.

2008-11-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added size_t cast into P4EST_ALLOC_ZERO macro. Updated libsc.

2008-11-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Removed global_last_quad_index except in partition_given.

2008-11-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Using global_first_quadrant instead of global_last_quad_index.

2008-11-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Introduced global_first_quadrant.  This variable will eventually
	replace global_last_quad_index.

2008-11-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Maintenance on the p4est and p8est .h files.

2008-11-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed mismatched P4EST_DEBUG endif.

2008-11-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed unitialized num_procs variable.

2008-11-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added debug test for sorted points.

2008-11-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Make the maximum number of points per quadrant configurable.

2008-11-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added bug on removing unnecessary global communications.

2008-11-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Finish new_points forest creation function.

2008-11-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added verification and refinement to new_points.

2008-11-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Flip the 2D points selection to x, z and prefix output.

2008-11-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added point initialization function.

2008-11-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote reset_data function.

2008-11-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made quadrant_is_equal work for nodes.

2008-11-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote p4est_quadrant_contains_node function.

2008-11-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Renovated quadrant initialization in p4est_complete_region.

2008-11-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added MPI_MODE_UNIQUE_OPEN flag to p4est_save.

2008-11-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Extended the points example to 3D.

2008-11-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Extended the p4est_points file to 3D.

2008-11-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added vtk output and balance and partition to points example.

2008-11-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Started example for point based octree construction.

2008-11-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Started p4est_points file for point-based octree construction.

2008-11-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote node_to_quadrant function.

2008-11-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Renamed the tree counter from jl to jt and fix a boolean.

2008-11-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added optional quadrant argument to p4est_comm_global_partition.


2008-11-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added bug on the removal of MPI_COMM_NULL.

2008-11-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Updated to current libsc featuring a parallel sort.

2008-11-15  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remove the volume field from trilinear_mesh_t.

2008-11-14  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Make p4est_init print the build configuration.

2008-11-13  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Configure load/save of environment controlled arguments.

2008-11-13  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Safety compile time checks for p4est/p8est interplay.

2008-11-12  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Use libsc with updated configure checks.

2008-11-11  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added bug on connectivities without vertices.

2008-11-11  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Make p8est load and save work with empty edge/corner
	connectivity.

2008-11-10  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Upated to current libsc.

2008-11-09  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Ensuring conforming MPI I/O with (updated) libsc.

2008-11-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Changed p4est ondisk format to make shorter deterministic files.


2008-11-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Align the saved p4est information on a 16 byte boundary.

2008-11-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Using sc_mpi_write function in p4est_save.

2008-11-06  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Allow the MPI I/O write to be turned on

2008-11-06  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add a parallel save using MPI I/O

2008-11-06  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added lower left element coordinates to trilinear interface.

2008-11-06  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Updated libsc.

2008-11-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed node clamp for non-MPI builds.

2008-11-04  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add a isshell variable to the trilinear mesh  This will default
	to false.  It is expected to be set by the octor_extract_mesh
	function.

2008-11-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Closed bug caused by incomplete balance in Rhea.

2008-11-03  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add a bug report for the hot+p4est bug

2008-11-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Updated the documentation.

2008-11-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Passing binary flag to fopen for compatibility.

2008-11-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Finished p4est binary load/save functions.

2008-10-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Completed save and implemented the load function.

2008-10-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Implemented concurrent p4est save.

2008-10-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Cleaned up the connectivity load/save API.

2008-10-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Decreased the log level of a per-tree balance message.

2008-10-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Removed the speed penalty for many-tree balance_response.

2008-10-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made examples use full balance again to save checksum
	regression.

2008-10-31  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add node along with element patch ids

2008-10-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added the bugs directory to the distribution.

2008-10-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Removed trailing commas to allow C++ compilation.

2008-10-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added some bug information about edge/corner connectivity.

2008-10-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added bug reports about vtk output and inter-tree balance.

2008-10-30  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Teach p4est about octor's neighborhood types

2008-10-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added feature request for machine-independent text-based
	load/save.

2008-10-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Optimized quadrant hash for 2D. Updated libsc.

2008-10-29  Carsten Burstedde <carsten@dhcp-67-22.ices.utexas.edu>

	* : Updated libsc.

2008-10-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Removed the obsolete p4estsplint script.

2008-10-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added git-version-gen to config and updated libsc.

2008-10-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Using AX_C_VERSION macro that is now in libsc.

2008-10-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Restricted 64bit MPI types to MPI_LONG_LONG_INT.

2008-10-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Changed the default install path to local.

2008-10-29  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Replace the depreciated git-log with git log

2008-10-29  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Include git version numbering from gnulib

2008-10-21  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added two p4est bug reports.

2008-10-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added patch_id field to trilinear_mesh.

2008-10-17  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Lint now recursive, bumped libsc and introduced .p4c file
	extension.

2008-10-17  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Functions sc_fwrite and sc_fread are now in libsc.

2008-10-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Completed connectivity load/save in 3D.

2008-10-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote load, save, compare and test case for 2D connectivity.

2008-10-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : The balance type is now configurable, added two tests.

2008-10-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Introduce P4EST_BALANCE_* flags. Without effect still.

2008-10-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Starting using the ditz bug tracking system.

2008-10-15  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Disabled buggy or suspicious local balance optimizations.

2008-10-08  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added text files describing the balance algorithm.

2008-10-08  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed a warning.

2008-10-08  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Using extern C macros from updated libsc.

2008-08-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Included sc statistics fix and removed two warnings.

2008-08-18  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Implemented a spherical shell composed of 24 trees.

2008-08-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Updated to current libsc.

2008-08-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Using libsc MPI_Allgather replacement.

2008-08-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed uninitialized value warning.

2008-08-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Updated interface to sc ranges functions.

2008-08-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Updated interface to sc statistics functions.

2008-08-21  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Updated TODO file and libsc revision.

2008-08-21  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added p4est_refine_level API function.

2008-08-18  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made p4est_refine initialize all intermediate quadrants.

2008-08-18  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Pulled in updated sc library.

2008-08-18  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Updated p4est to compile with current Rhea.

2008-08-15  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Improved zlib test for external libsc.

2008-08-15  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed a non-MPI segmentation fault.

2008-08-15  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed some non-MPI warnings.

2008-08-15  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Renamed sc_generic_abort according to libsc.

2008-08-15  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Extended test_valid with checksums.

2008-08-15  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Changed p8est connectivity: periodic and rotwrap.  What was
	periodic before is now called rotwrap. Periodic now creates a
	straight-all-periodic unit cube.

2008-08-15  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed a compiler warning.

2008-08-12  Carsten Burstedde <carsten@ices.utexas.edu>

	* : The face_quadrant_exists now includes orientation information.

2008-08-11  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Modified face_quadrant_exists to compute hanging face number.

2008-08-11  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added face_child_hang table to connectivity.

2008-08-10  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote face_quadrant_exists function.

2008-08-10  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added p4est_face_dual table to connectivity.

2008-08-10  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added local quadrant offset to the tree structure.

2008-08-10  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Changed ghost layer API and function to piggy-back local number.


2008-08-10  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made p4est_quadrant_find_owner public and changed API.

2008-08-10  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Moved half and all face neighbor functions into bits.

2008-08-11  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Pulled in the PAPI update in libsc.

2008-08-09  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Passing clamp flag to node piggy hash and equal functions.

2008-08-09  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Pulled in the PAPI config flag in libSC.

2008-08-09  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made make dist work with --with-sc=dir specified.

2008-08-08  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Enhanced configure logic so it can be used from mangll.

2008-08-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Removed the limitation of nodes-per-sharer at 32768.

2008-08-06  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed a warning.

2008-08-06  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Changed the API of the coarsen callback function.

2008-08-06  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Documentation updates.

2008-08-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed some lint warnings.

2008-08-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Some changes to make p4est work with Rhea.

2008-08-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Unclamping the nodes of the mesh.

2008-08-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Turned some global variables info function arguments.

2008-08-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Using sc_ranges_adaptive in balance and nodes.

2008-08-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Switched order of Waitall and Reduce, minor cleanups.

2008-08-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added ghost layer, nodes and trilinear mesh to timings.

2008-08-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Compute and output more statistical information on mesh data.

2008-08-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed edge and face hanging node assignment.

2008-08-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote trilinear mesh extract and delete.

2008-08-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed some lint warnings.

2008-08-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixes to p4est_nodes new and extended p4est_nodes_is_valid.

2008-08-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Completed p4est_nodes_new.

2008-08-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Finished communication processing in p4est_nodes_new.

2008-08-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Moved integer comparison functions into libsc.

2008-08-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix race condition in test_file and read_forest.

2008-08-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed abort handlers.

2008-08-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Updated libSC, support --with-mpitest to set TESTS_ENVIRONMENT.


2008-08-01  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote second round of node communications.

2008-08-01  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed connectivity in 2D and 3D for the periodic cases.

2008-08-01  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Extended test_valid for both 2D and 3D.

2008-07-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Using overlaps_tree and is_inside_tree in complete_or_balance.

2008-07-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added first_desc and last_desc members to p4est_tree_t.  This
	should speed up the overlaps_tree function and the newly added
	is_inside_tree function.

2008-07-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed int32 overrun in statistics counter.

2008-07-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added improved timings with adaptive range communication.

2008-07-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Introduced padding into quadrant and node structures.

2008-07-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made balance range coding adaptive. Increased max range count.

2008-07-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote first round of the node communications.

2008-07-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Moved comm ranges code into SC. Other optimizations to balance.


2008-07-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Using new SC version of checking BLAS/LAPACK, fixed p4estindent
	script.

2008-07-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Updated to hash_array_insert API and fixed face hanging counts.


2008-07-18  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Commented on some type warnings, added p4est_int16_compare.

2008-07-18  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Implemented the serial portion of the node numbering.

2008-07-17  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Migrated to the changed hash function API.

2008-07-17  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Moved part of the mesh file into the new ghost file.

2008-07-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added bool flag to touches_edge, _corner. Done
	node_canonicalize.

2008-07-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Canonicalizing a node across faces.

2008-07-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Enhanced some bits functions to understand nodes.

2008-07-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Identifying hanging nodes now. Moved neighborhood stub.

2008-07-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made p4est_possible_node_neighbor a static function.

2008-07-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Distinguish now between quadrant and node MAXLEVEL.

2008-07-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made command line options consistent.

2008-07-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Two non-functional changes.

2008-07-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added curretn 2D and 3D scaling numbers.

2008-07-14  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Extended timings example to 3D.

2008-07-14  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Work around a PGI compiler bug.

2008-07-14  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Using Bob Jenkins' hash function for quadrants.

2008-07-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Finished 3D corner balance checks.

2008-07-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Renovated on_face_boundary, 3Dified on_corner_boundary.

2008-07-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added 3D corner neighbors to the ghost layer.

2008-07-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added two more function to p4est_bits.

2008-07-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Moved edge and corner owner check inside the function.

2008-07-06  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Finished the 3D edge balance check.

2008-07-06  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added edge neighbors to the 3D ghost layer.

2008-07-06  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added some small auxiliary functions to p4est_bits.

2008-07-06  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added 3D balance test.

2008-07-06  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made 3D face ghosts and balance check work.

2008-07-06  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added p4est_quadrant_face_neighbor function to p4est_bits.

2008-07-06  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made some mesh aux functions use parameter arrays.

2008-07-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made quadrant_on_corner_boundary more strict.

2008-07-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Worked on extending the ghost layer to 3D.

2008-07-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added some type comments for Intel compiler warnings.

2008-07-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Bundled the optimizations for balance and ghost_layer.

2008-07-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed partition_given for empty processors.

2008-07-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Handling zero and highest level quadrants correctly.

2008-07-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made p4est_is_valid synchronize the result.

2008-07-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Implemented an optimization to build_ghost_layer.

2008-07-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made build_ghost_layer and is_balanced exit cleanly on failure.


2008-07-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote comm function to globally evaluate a boolean flag.

2008-07-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fill in the owner_rank data element of the ghost layer.

2008-07-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed duplicate quadrants in ghost layer.

2008-07-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made ghost layer work in parallel. See TODO.txt for details.

2008-07-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Is_balance seems to be working on a single core now.

2008-07-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Ran through p4est_mesh, some fixes and major alignment.

2008-07-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed one array bug and many lint warnings.

2008-07-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made the ghost layer code compile after rebase.

2008-02-13  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add 2-1 check.

2008-02-13  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Send the ghosts.

2008-02-13  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Fix various bugs.

2008-02-12  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Build the ghost layer in the is_balanced function.  Now we can
	start debugging things.

2008-02-12  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Send/Recv the ghost layer counts.

2008-02-12  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Build the send buffers for the ghost elements.

2008-02-11  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add a stub to check the 2 to 1 balance.

2008-02-11  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add stubs for the ghost layer calculation.

2008-07-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : One assertion and minor comment update.

2008-07-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Changed prototype to remove a lint warning.

2008-07-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Started implementing the 3D neighborhood.

2008-07-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Removed unnecessary overlap check.

2008-07-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Enabled recursive flag for coarsen and refine.

2008-07-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote p4est_comm_tree_info function.

2008-07-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Changed global_first_position into a quadrant array.

2008-07-01  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Started p8est_trilinear files with neighborhood information.

2008-07-01  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Minor cosmetic changes.

2008-07-01  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Optimization on the balance_subtree function.

2008-07-01  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Unified the 2D and 3D corner handling.

2008-06-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Hardcoded some 3D checksums into the p8est_simple example.

2008-06-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Implemented inter-tree corner balance.

2008-06-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Implemented remaining corner connectivity logic.

2008-06-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added rebalance checks.

2008-06-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made checksum work with MPI_COMM_NULL.

2008-06-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Completed connectivity edge handling.

2008-06-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Remaining fixes to 3D edge balance.

2008-06-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed inverted vertex ordering in p8est_vtk.

2008-06-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added an example with two cubes.

2008-06-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Writing the tree id in 3D VTK output.

2008-06-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added two more cubes and one more edge to rotcubes example.

2008-06-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Some cleanups on lint and fprintf (stderr).

2008-06-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Replaced fprintf (stderr) by P4EST_NOTICE, P4EST_LERROR.

2008-06-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : First shot at finalizing the 3D edge balance.

2008-06-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote p8est_quadrant_edge_level function.

2008-06-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Extended is_almost_sorted to 3D and first pass of edge balance.


2008-06-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote p8est_quadrant_transform_edge function.

2008-06-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Unified naming of 3D transform functions.

2008-06-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Implemented p8est_find_edge_info.

2008-06-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Extended the 3D connectivity with edges and corners.

2008-06-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Some assertion cleanups.

2008-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made make distclean work.

2008-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Optimized 3D find_face_transform.

2008-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed bug in allocation of edge_reverse.

2008-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed unit cube and periodic xyz coordinates.

2008-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed some lint warnings.

2008-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Implemented inter-tree face balance.

2008-06-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote 3D quadrant face transform glue and functions.

2008-06-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Enabled intra-tree parallel balance.

2008-06-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made remove_nonowned and linearize_tree return the count.
	Cleanups.

2008-06-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added a pointer-array version of quadrant_is_family.

2008-06-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote 3D and updated 2D quadrant test.

2008-06-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed up the negative quadrant indices in set_morton.

2008-06-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added array versions and tests for _childrenv and _is_familyv.

2008-06-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Hardcoded checksum regression tests for the examples.

2008-06-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Corrected a 3D ifdef mismatch and removed some warnings.

2008-06-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Removed code obsoleted by new removed_nonowned function.

2008-06-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote remove_nonowned and fixed complete_or_balance.

2008-06-19  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Limited extended quadrants to 3x3 tree box.

2008-06-17  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fix forgotten 3D-ification in p4est_communication.

2008-06-17  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added rotcubes to p8est_simple example. Few minor updates.

2008-06-17  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Implemented the face connectivity relations. Added a 3D test.

2008-06-17  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Deleted ChangeLog and wrote test for
	p4est_quadrant_overlaps_tree.

2008-06-17  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Updated to latest sc version.

2008-06-17  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added p4est_quadrant_overlaps_tree and renamed not to skip.

2008-06-16  carsten <carsten@ices.utexas.edu>

	* : Adapted assertions to empty tree creation.

2008-06-16  carsten <carsten@ices.utexas.edu>

	* : Disable vararg macros for C++ and externalize
	init_quad_per_proc.

2008-06-15  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Started working on the local balance function.

2008-06-15  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Activated balance and helper functions. Mostly no-ops.

2008-06-09  carsten <carsten@ices.utexas.edu>

	* : Wrote some basic p8est_connectivity_is_valid checks.

2008-06-13  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Split algorithms into 2 files. New files are named p4est_bits.

2008-06-08  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote VTK output in 3D and fixed up some 2D things too.

2008-06-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Removed p4est_vtk_binary subroutine that is now in libsc.

2008-06-06  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Very minor fixes, made it say 0.3.0 now.

2008-06-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Generalized refine, coarsen, partition and test_partition.

2008-06-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Converted enough functions to 3D to make a primitive example
	run.

2008-06-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Generalized all small algorithm functions to 3D.

2008-06-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Implemented some 3d algorithms and pulled in more .c files.

2008-06-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Started p8est with conn, p4est, algo headers and simple example.


2008-06-06  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Some fixes to release 0.2.0.

2008-06-05  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Ran autoupdate and added the remaining same type comments.

2008-06-05  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Generate warning messages from autotools.

2008-06-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed np>1 bug in test_comm.

2008-06-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made p4est_connectivity_is_valid return bool.

2008-06-04  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Clean up the vtk output to all for different types of integers.
	Note that I am currently assuming that the mpi rank can fit in a
	p4est_locidx_t.

2008-06-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Realizing an optional external libsc with configure.

2008-06-04  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed some format warnings and added same type comments.

2008-06-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed some loop variables in p4est_mesh.c.

2008-06-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed the remaining test case for integer rewrite.

2008-06-03  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Removed some int32_t and put some assertions into test_order.

2008-06-02  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Use p4est_topidx_t in the connectivity file.

2008-06-02  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Fix many int warnings in partition_given.

2008-06-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Introduced boolean flag for allocation of vertex coordinates.

2008-06-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Last bit set of warnings on the main p4est files.

2008-06-01  Carsten Burstedde <carsten@ices.utexas.edu>

	* : More integer fixes.

2008-05-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Hunted down a bunch of warnings.

2008-05-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Removed a few splint and gcc warnings.

2008-05-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Introduced p4est_topidx_t typedef for topological entities.

2008-05-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Changed p4est_int64_lower_bound to size_t, moved away
	test_pqueue.

2008-05-29  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Use strtoll instead of atoll.

2008-05-29  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Make lint happy with p4est_file.c.

2008-05-29  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Make splint happy with p4est_vtk.c.

2008-05-29  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Make p4est_mesh.h use p4est_locidx_t.

2008-05-29  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Remove lint warnings in p4est_mesh.c.  I also made it use
	p4est_locidx_t and friends.

2008-05-29  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Removed more unused variables.

2008-05-29  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Remove unused variable.

2008-05-29  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Read in the Vertex to Vertex field from the mesh file.  Do not
	assume that all read in meshes are nonperiodic.

2008-05-29  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add a missing [Vertex to Element] in the connectivity output.

2008-05-29  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Fix the documentation about the [Vertex to Element] field.

2008-05-29  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Fix the read_forest example so that it provides vertex
	information.  The connectivity print function is also updated.  I
	also updated the error message when the vertex information does not
	exist.

2008-05-29  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Replace M_PI with a computed value.  This is done because the
	gcc compiler does not have M_PI when compiled with -std=c99.

2008-05-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made p4est compile with MPI again. Cleaned up some headers.

2008-05-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Integrated a lot of macro and mpi dummy changes.

2008-05-28  carsten <carsten@ices.utexas.edu>

	* : Always using the MPI_Bcast function.

2008-05-28  carsten <carsten@ices.utexas.edu>

	* : Integrated the new libsc package and log handling.

2008-05-28  carsten <carsten@ices.utexas.edu>

	* : Removed the options example from p4est.

2008-05-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed a bunch of splint warnings.

2008-05-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Removed some unnecessary includes of p4est_base.h.

2008-05-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Moved signal and abort handler into libsc, more cleanup.

2008-05-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Removed log4c based logging, using libsc instead.

2008-05-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Cleaned up the p4est macros.

2008-05-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Changed p4est to use memory allocation from libsc.

2008-05-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Removed p4est_memory in favor of sc_containers. Moved avl to
	libsc.

2008-05-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Un-recursified p4est. Removed code that's already in libsc.

2008-05-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Integrated some autoconf and include adaptations.

2008-05-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Adapted p4est to use autoconf from and build with sc.

2008-05-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Started p4est 0.2. This version will be based on libsc.

2008-04-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Figuring out MPI_INCLUDES and enabling splint target.

2008-04-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Removed GNU_SOURCE from configure.ac, fixed warnings.

2008-04-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Hopefully killed the annoying AC_CONDITIONAL warning.

2008-04-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Enabled ini file loading in the option parser.

2008-04-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added const to some char * parameters in iniparser.

2008-04-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added p4est_strdup function and macro.

2008-04-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed bug in iniparser and added error output variable.

2008-04-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added iniparser3.0b library into the automake system.

2008-04-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote code to handle and parse option arguments.

2008-04-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Submitting the good 32k p4est scaling.

2008-02-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Updated scalings up to 16384 cores.

2008-02-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Finally fixed the christmas bug in balance.

2008-02-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed bug in weighted p4est_partition.

2008-02-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Checking for correct Waitall/Waitany error semantics.

2008-02-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Recognizing JOB_ID and JOB_NAME environment. Added bug test
	case.

2008-02-21  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Checking receive counts with MPI_Get_count.

2008-02-21  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Checking receive counts with MPI_Get_count.

2008-02-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Checking status information for MPI_Waitsome, MPI_Waitall.

2008-02-18  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Enhanced test_quadrants with linear id consistency check.

2008-02-18  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Modified quadrant structure for explicit piggy back load.

2008-02-18  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Swapped MPI_CHAR for MPI_BYTE and added sleep (1) to
	p4est_abort.

2008-02-18  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Writing additional per-core log file in debug mode.

2008-02-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Minor fixes on p4est_memory.

2008-02-14  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Some API and internal change to p4est_avl.  Using P4EST_ALLOC
	and P4EST_FREE now which abort on out-of-memory. Thus avl_insert
	does not need the errno EEXIST any more. The avl_foreach callback
	now takes a void * user data pointer.

2008-02-13  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed global_partition bug for empty processors.

2008-02-12  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made it compile with MPI again.

2008-02-11  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Allow code to compile without mpi.

2008-02-08  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Some more variable type cleanups.

2008-02-08  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made splint work again. Random variable type adaptations.

2008-02-08  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added p4est_types.h. Some cleanup on types and config
	directives.

2008-02-08  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Removed unnecessary collective call from p4est_new.

2008-02-08  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Converted global_first_indices to global_first_position.

2008-02-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Using P4EST_ROOT_LEN macros and friends. Some type fixes.

2008-02-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add scalings up to 6144 cores.

2008-02-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote alternate array_resize function that does not use realloc.


2008-02-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added zlib and mpi header files to splint directory for checking
	only.

2008-02-07  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Removed some int64 related warnings.

2008-02-02  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Created p4estsplint script and removed splint parse errors.

2008-02-01  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add more things to the wishlist.

2008-02-01  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Test periodic and zero element procs.

2008-02-01  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Introduced flag to disable periodic b.c. in
	order_local_vertices.

2008-02-01  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed two integer roundoff issues.

2008-02-01  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Don't need to fill the node again of the checking quadrant.

2008-02-01  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Two minor fixes for local ordering.  Should work now for empty
	trees and periodic boundary conditions.

2008-02-01  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Remove a few more uninitialized warnings from gcc.

2008-02-01  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Initialize pointers to NULL to remove gcc warnings.

2008-02-01  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add stddef.h to the included headers for offstof.  This is
	required for the mac to compile.

2008-02-01  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Converted most int_8 variables to int.

2008-02-01  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Non-functional change on header files and integer types.
	Including p4est_base.h topmost in every .c file, and in no .h file.
	Started to replace int8_t by int where storage is not critical.
	Introduced typedefs for local and global integer types.

2008-02-01  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add another item to the wish list.

2008-02-01  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add a test for the local node ordering.

2008-02-01  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Remove dead code which should be a nonfunctional change.

2008-02-01  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Update the TODO file.  I have removed the things that we have
	done.  We also need to to gather the ghost elements.  This is
	critical for the mesh extraction.

2008-01-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Converted p4est_memory to use size_t and ssize_t.

2008-01-31  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add the faces to the local node ordering.  This should be a
	unique ordering if the mesh is 2-1 face and node wise.

2008-01-31  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Transform the nodes between trees.

2008-01-30  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Order the corners of trees.

2008-01-30  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Build a local tree ordering for the mesh vertices.  The next
	step is to do this for the intertree case.

2008-01-30  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : All so use the connectivity data from the local ordering.

2008-01-30  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Make p4est_array_bsearch return the index of the search.

2008-01-24  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Begin the loop over the nodes of the elements.

2008-01-24  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add a helper function to find the node neighbors of a quadrant.


2008-01-22  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Move the node ordering stub into the p4est_mesh files.

2008-01-22  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Move the vtk connectivity information into its own function.

2008-01-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added a scalings.txt file in the doc directory.

2008-01-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Removed p4est->local_num_trees, fixed zero element processors.

2008-01-31  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Enabled processors with zero quadrant count, unfinished for
	partition_given.

2008-01-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Removed some warnings about printf format conversion.

2008-01-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added p4est_quadrant_is_inside function.

2008-01-30  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added different configurations to timings.

2008-01-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixing number of window assertion.

2008-01-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Looked through the log priorities in p4est_algorithms.c.

2008-01-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Looked through the log priorities in p4est.c.

2008-01-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Removed p4est->nout member, using new logging everywhere
	instead.

2008-01-29  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Started using the new log functionality.

2008-01-28  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Cleaned up the logging logic. Not using it yet.

2008-01-28  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added source files from log4c-lite. Needs modification for
	p4est.

2008-01-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Implemented vertex identification across corners.

2008-01-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Introduced vertex_to_vertex array in connectivity.

2008-01-27  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Implemented periodic connectivity across faces.

2008-01-26  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added reciprocity checks in connectivity.

2008-01-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Output real peer counts in debug mode.

2008-01-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Changed corner to z-ordering in p4est_algorithm functions.

2008-01-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Performance fixed for hash table size calculation.

2008-01-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made the hash table change size automatically.

2008-01-25  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Converted alloced into static arrays for hash and mempool.

2008-01-24  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : This removes a compiler warning when compiling without mpi.

2008-01-24  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add some items to the TODO/Wish list.  These don't need to be
	done right now but someday.

2008-01-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added validity check at the end of partition.

2008-01-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Using a local variable for tree->quadrants where sensible.

2008-01-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Messy change of tree->quadrants from alloced to static array.

2008-01-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Some fixes for quadrant algorithms wrt. extended coordinates.
	Make all quadrant query functions tolerant against invalid input.
	Make all quadrant creation functions abort on invalid input.

2008-01-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed some extreme cases in weighted partition.

2008-01-24  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Fixed the cuts to be int64_t now.

2008-01-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Completed weighted partition.

2008-01-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote p4est_copy and worked on weighted partition.

2008-01-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added weight function to partition prototype. Not usable yet.

2008-01-23  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made some static algorithms public.

2008-01-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Implemented second pass of corner balance, some cleanup.

2008-01-22  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added an example to test the second pass of balance.

2008-01-21  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Implemented first pass of corner balance.

2008-01-21  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added star-shaped domain for corner balance.

2008-01-21  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Added simple example evil3 to test second pass of balance.

2008-01-21  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Implemented second round of inter-tree balance. Minor cleanup.

2008-01-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Bugfix in important internal function.

2008-01-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Extended balance to same-processor inter-tree contact.

2008-01-20  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Properly extended complete_or_balance.

2008-01-18  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Balancing inter-tree first pass without same-processor
	boundaries.

2008-01-18  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Renamed connectivity_verify to connectivity_is_valid.

2008-01-18  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote connectivity_verify and connectivity_new_moebius.

2008-01-17  Carsten Burstedde <carsten@ices.utexas.edu>

	* : A few more negative quadrant tests.

2008-01-17  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Valid quadrants should be the only ones with data.

2008-01-17  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Finished up is_valid->is_extended test cases.

2008-01-17  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Partial cleanup of extended quadrants.

2008-01-17  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Extended quadrant_compare functions.

2008-01-17  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Preparations for negative quadrant coordinates.  Made
	quadrant_is_extended, linear_id, set_morton, hash work for negative
	quadrant coordinates x, y.

2008-01-17  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add a first set of tests for negative quadrants.  These are not
	all fully tested since some of them fail right now.

2008-01-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Shipping first load of inter-tree quadrants now.

2008-01-16  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Non-functional updates on balance.  Replaced binary search in
	send_first with search backwards. Fixed preparation of inter-tree
	quadrant to send.

2008-01-16  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add the vertex_to_tree vector which is read in from the forest
	file.

2008-01-16  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Only update the element count if we copy from them.  This is
	done because from_tree might be invalid if num_copy==0.

2008-01-14  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Made it compile again without --enable-mpi.

2008-01-14  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote two scripts to remove all HAVE_MPI code.

2008-01-11  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote array_uniq and finished quadrant_compare_piggy.

2008-01-11  Carsten Burstedde <carsten@ices.utexas.edu>

	* : More preparations for shipping inter-tree quadrants.

2008-01-11  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Prepared shipment of quadrant across tree boundary.

2008-01-11  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add find_face_transform and quadrant_is_extended functions.

2008-01-11  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Wrote inter-tree quadrant transformation.

2008-01-10  Carsten Burstedde <carsten@ices.utexas.edu>

	Merged with lucas.

2008-01-10  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add in some checks for leaks in mempool memory.  I needed to
	explicitly remove the memory for the user_data when a forest was
	destroyed.  Also hash allocations need to be explicitly deallocated
	before the hash is destroyed.

2008-01-10  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Minor formatting change.  This non functional change prevents
	the whole file from being folded in my editor, vim.

2008-01-10  Carsten Burstedde <carsten@ices.utexas.edu>

	* : More careful memory alignment in obstack and array_resize.

2008-01-10  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Cleaned up array_resize and other code bits.  Using powers of 2
	in reallocation always. Fixed some warnings and mpi return values.

2008-01-10  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add a test to make sure the user_data is getting passed on.

2008-01-10  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Moved logarithm into p4est_base, added roundup_32powerof2.

2008-01-10  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add timings for partition and a repartition.

2008-01-10  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add the partition function to simple.

2008-01-09  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add an equal partition function.

2008-01-07  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add the partition function given the number of quads per
	processor.

2008-01-07  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add a checksum test before and after a partition.  This should
	check to see if we have lost any quadrants during a partition.

2008-01-04  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Remove the communication in the check.

2007-12-14  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add p4est_partition_given stub and test case.  Add the test cast
	that I am going to program to.  Note that this testcase should
	always work on one processor so it needs to be run with MPI for a
	true test.

2007-12-18  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add the communication of the index of the last quadrant on each
	processor.  This adds a field to p4est_t that holds the index in the
	global order of the last quadrant on each processor.  This changes
	the way the total number of global quadrants was calculated.  A test
	was added to double check the communication.

2008-01-09  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Add line buffering and signal handlers.

2008-01-09  Carsten Burstedde <carsten@ices.utexas.edu>

	* : Removed assertion on is_complete in balance, too strict.

2008-01-08  carsten <carsten@ices.utexas.edu>

	* : Computing and distributing peer windows now.

2008-01-08  carsten <carsten@ices.utexas.edu>

	* : Sharper bounds for balance peers. Prepared peer windows.

2008-01-08  carsten <carsten@ices.utexas.edu>

	* : Changed the last waitsome to waitall, use barriers in timings.

2008-01-08  carsten <carsten@ices.utexas.edu>

	* : Added foreach function to avl tree library.

2008-01-08  carsten <carsten@ices.utexas.edu>

	* : Improved statistics on zero and nonzero load in balance.

2008-01-08  carsten <carsten@ices.utexas.edu>

	* : Added avl tree code from Debian libavl 0.3.5-2.

2008-01-07  carsten <carsten@ices.utexas.edu>

	* : Waiting for send operations in balance.

2007-12-30  carsten <carsten@ices.utexas.edu>

	* : Fixed huge performance hit in debug mode with -O0.

2007-12-28  carsten <carsten@ices.utexas.edu>

	* : Removed some unnecessary computations from quadrant_checksum.

2007-12-28  carsten <carsten@ices.utexas.edu>

	* : Made quadrant checksums machine independent.

2007-12-27  carsten <carsten@ices.utexas.edu>

	* : Made p4est_checksum system independent.  Also computing checksum
	for second comm round of balance.

2007-12-27  carsten <carsten@ices.utexas.edu>

	* : More checksum facilities.  Setting all static quadrant memory to
	defined values. Wrote p4est_checksum. Renamed array checksum
	function. Using checksum for first pass in balance. Enhanced timings
	example to use checksums.

2007-12-27  carsten <carsten@ices.utexas.edu>

	* : Hardened p4est_memory in debug mode.  In debug mode, array and
	memory pool always initialize memory. Free bytes are set to (char)
	-1 to make checks reproducible. Also added a fast checksum function
	for the array.

2007-12-23  carsten <carsten@ices.utexas.edu>

	* : Implemented second round of communication in balance.

2007-12-23  carsten <carsten@ices.utexas.edu>

	* : Overlap now removing already sent quadrants. Prepare second
	round.

2007-12-21  carsten <carsten@ices.utexas.edu>

	* : Fixed a number of bugs in balance.  Now correctly identifying
	overlap, much cheaper. Fixed case of missing free_user_data calls.
	Fixed a treecount and a comparison invocation. The second round of
	communication is still missing.

2007-12-21  carsten <carsten@ices.utexas.edu>

	* : Enhanced simple example with usage message and evil test case.

2007-12-21  carsten <carsten@ices.utexas.edu>

	* : Added p4est_abort_handler. Using it in p4est_simple.

2007-12-21  carsten <carsten@ices.utexas.edu>

	* : Enhanced p4est_is_valid.

2007-12-19  carsten <carsten@ices.utexas.edu>

	* : Removed a remaining printf.

2007-12-19  carsten <carsten@ices.utexas.edu>

	* : Removed some printfs and ran ccgoindent.

2007-12-19  carsten <carsten@ices.utexas.edu>

	* : Fixed two warnings. Made simple refine trees differently.

2007-12-19  carsten <carsten@ices.utexas.edu>

	* : Fixed a bug in balance and reactivated it.

2007-12-19  carsten <carsten@ices.utexas.edu>

	* : Running second pass of balance_subtree. Still deactivated.

2007-12-19  carsten <carsten@ices.utexas.edu>

	* : Temporary bugfix commit.

2007-12-18  carsten <carsten@ices.utexas.edu>

	* : Temporary commit working on compute_overlap.

2007-12-17  carsten <carsten@ices.utexas.edu>

	* : Started tree_compute_overlap algorithm.

2007-12-17  carsten <carsten@ices.utexas.edu>

	* : Fix too large array size.

2007-12-17  carsten <carsten@ices.utexas.edu>

	* : Completed first round of communication for inter-proc balance.

2007-12-16  carsten <carsten@ices.utexas.edu>

	* : Intermediate work on p4est_balance.

2007-12-16  carsten <carsten@ices.utexas.edu>

	* : Started working on inter-processor balance.

2007-12-18  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add a three mesh corner example.

2007-12-16  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Allow compile even without mpi and ran p4estindent.

2007-12-15  carsten <carsten@ices.utexas.edu>

	* : Wrote array_init and array_reset. Change hash size in balance.

2007-12-15  carsten <carsten@ices.utexas.edu>

	* : Added timing of rebalance. Fix another warning in test_hash.

2007-12-14  carsten <carsten@ices.utexas.edu>

	* : A minor optimization for speed. Fixed a warning.

2007-12-14  carsten <carsten@ices.utexas.edu>

	* : Wrote comm_global_partition to distribute processor boundaries.


2007-12-14  carsten <carsten@ices.utexas.edu>

	* : Added timings example. Performance optimizations to local
	balance.

2007-12-13  carsten <carsten@ices.utexas.edu>

	* : Fix optimization path, some rearranging of cleanup actions.

2007-12-13  carsten <carsten@ices.utexas.edu>

	* : Fixed one warning and reorderd one if condition.

2007-12-13  carsten <carsten@ices.utexas.edu>

	* : Heuristic for hash table size, print hash occupancy statistics.


2007-12-13  carsten <carsten@ices.utexas.edu>

	* : Started p4est_communication files. Optimization to
	complete_or_balance.

2007-12-12  carsten <carsten@ices.utexas.edu>

	* : Added p4est_balance, local only for now. Some fixes.

2007-12-12  carsten <carsten@ices.utexas.edu>

	* : Wrote balance_subtree and quadrant_sibling.

2007-12-11  carsten <carsten@ices.utexas.edu>

	* : Added first_descendent function.

2007-12-11  carsten <carsten@ices.utexas.edu>

	* : Started work on balance_subtree and test_balance. Add
	last_descendent.

2007-12-11  carsten <carsten@ices.utexas.edu>

	* : Fix element counting in list_remove.

2007-12-11  carsten <carsten@ices.utexas.edu>

	* : Storing list structures, not pointers now. Added list_init,
	list_reset.

2007-12-11  carsten <carsten@ices.utexas.edu>

	* : Added list_remove, hash_lookup, hash_remove. Enhanced hash test.


2007-12-11  carsten <carsten@ices.utexas.edu>

	* : Added a simple hash table implementation.

2007-12-07  carsten <carsten@ices.utexas.edu>

	* : Extensions to p4est.array.  Added a bsearch function and
	priority queue functions with test.

2007-12-06  carsten <carsten@ices.utexas.edu>

	* : Removed some gcc warnings and test failure. Add debug config
	switch.

2007-12-05  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add the mpirank as CellData.

2007-12-05  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Make baseName a const pointer.

2007-12-05  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Removed low level io from read_forest.

2007-12-05  carsten <carsten@ices.utexas.edu>

	* : Added vtk output to simple. Minor non-functional changes.  Added
	libb64 paragraph to AUTHORS. Removed three warnings.

2007-12-04  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add vtk output of the p4est structure.

2007-12-04  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Make the conversion from int->char explicit.  This was done to
	get rid of the following warning message from the intel compliers.
	remark #810: conversion from "int" to "char" may lose significant
	bits

2007-12-04  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Format the decoding array nicer.  This is not a functional
	change.  It is just to make p4estindent happy.

2007-12-04  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Commit libb64 from rhea.

2007-12-04  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add vtk configure switches and a check for compress2.

2007-12-05  carsten <carsten@ices.utexas.edu>

	* : Removed lowlevel io from test_file. Updated TODO.

2007-12-05  carsten <carsten@ices.utexas.edu>

	* : Added is_linear, linearize algorithms. Some improvements on
	coarsen.

2007-12-04  carsten <carsten@ices.utexas.edu>

	* : Wrote is_family and coarsen functions, added some checks.

2007-12-03  carsten <carsten@ices.utexas.edu>

	* : Counting quadrants in refine now, add p4est_is_valid check.

2007-12-04  carsten <carsten@ices.utexas.edu>

	* : Minor updates on text files.

2007-12-04  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add reading/storage of the vertex coordinates of the trees.

2007-12-04  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Only compile the check programs when make check is run.

2007-12-04  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Make the comments 80 columns wide.

2007-12-04  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add a test for reading in a mesh file.

2007-12-04  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Split the description of the p4est library into two lines.  I
	split this because the description was longer than 80 chars.

2007-12-04  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add an example pre-commit hook that runs p4estindent.  This hook
	will check to make sure that all .[ch] files are indented with
	p4estindent.

2007-12-04  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Allow the connectivity to be printed to a file stream.

2007-12-03  carsten <carsten@ices.utexas.edu>

	Merge branch 'master' of /ices/lucasw/repos/p4est

2007-12-03  Lucas C Wilcox <lucasw@ices.utexas.edu>

	Merge branch 'master' of /ices/carsten/repos/p4est

2007-12-03  carsten <carsten@ices.utexas.edu>

	Merge branch 'master' of /ices/lucasw/repos/p4est

2007-12-03  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Have read_forest read the mesh from a temporary file.  This
	allows for running the program without a mesh file. The only
	requirement is that the cwd is writable.

2007-12-03  carsten <carsten@ices.utexas.edu>

	* : Added local and global counting of quadrants in p4est_new.

2007-12-03  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Only allocate the connectivity structure once.  This fixes a
	memory leak in p4est_connectivity_read.

2007-12-03  carsten <carsten@ices.utexas.edu>

	* : Added local and global counting of quadrants in p4est_new.

2007-12-03  carsten <carsten@ices.utexas.edu>

	* : Slight optimization of quadrant_is_next.

2007-12-03  carsten <carsten@ices.utexas.edu>

	* : Added GPL v3 license and copyright information.

2007-12-03  carsten <carsten@ices.utexas.edu>

	* : Copied is_next to is_next_D and made is_next it faster.

2007-11-30  carsten <carsten@ices.utexas.edu>

	* : First working version of is_next function, linear_id and
	tree_is_complete.

2007-11-29  carsten <carsten@ices.utexas.edu>

	* : Put many checks into test_quadrants. Prepared tree_is_complete.


2007-11-29  carsten <carsten@ices.utexas.edu>

	* : Fixes for subalgorithms and quadrant statistics.  is_sibling and
	is_ancestor now return 0 for equal quadrants. The compare function
	was slightly buggy. Now make check runs through ok and the output
	from simple looks good.

2007-11-29  carsten <carsten@ices.utexas.edu>

	* : Moved the heavyweight algorithm complete_region to the bottom.

2007-11-29  carsten <carsten@ices.utexas.edu>

	* : Some more p4est_algorithms and doc fixes.  Added is_parent,
	is_sibling and their descriptive versions. Also added a print_tree
	function.

2007-11-28  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add the TODO items from my board.

2007-11-28  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add some documentation.

2007-11-28  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add some defensive checks.

2007-11-28  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add a complete region algorithm.  This is also called in the new
	tree function p4est_new.

2007-11-27  carsten <carsten@ices.utexas.edu>

	* : Added quadrant_child_id and one more assertion for refine.

2007-11-27  carsten <carsten@ices.utexas.edu>

	* : Ran indent.

2007-11-27  carsten <carsten@ices.utexas.edu>

	* : One fix to refinement, wrote tree_is_sorted function.

2007-11-27  carsten <carsten@ices.utexas.edu>

	* : Wrote p4est_refine functions. Needs lots of testing.

2007-11-27  carsten <carsten@ices.utexas.edu>

	* : Added a linked list implementation.

2007-11-27  carsten <carsten@ices.utexas.edu>

	* : Wrote quadrant_children. Some documentation updates.

2007-11-27  carsten <carsten@ices.utexas.edu>

	* : Separated out connectivity routines. Starte test directory.

2007-11-27  carsten <carsten@ices.utexas.edu>

	* : No functional, some documentation changes.

2007-11-27  carsten <carsten@ices.utexas.edu>

	* : Completed nearest_common_ancestor, added quadrant_is_valid.

2007-11-26  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Ran indent on p4est_file.  Damn that indent!

2007-11-26  carsten <carsten@ices.utexas.edu>

	* : Ran indent on everything except p4est_file.

2007-11-26  carsten <carsten@ices.utexas.edu>

	* : Added two descriptive algorithm versions and quadrant_is_equal.


2007-11-26  carsten <carsten@ices.utexas.edu>

	* : Wrote quadrant_is_ancestor, quadrant_parent,
	nearest_common_ancestor.

2007-11-26  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add connectivity reading.  This allows the basic connectivity of
	the coarse mesh to be read from a file.  The example read_forest is
	updated to test some of the capabilities.

2007-11-26  Lucas C Wilcox <lucasw@ices.utexas.edu>

	Merge branch 'master' of /ices/carsten/repos/p4est

2007-11-26  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Include ctype.h in src/p4est_base.h.  Reading the mesh file is
	going to use isspace(3) from ctype.h to determine which characters
	are spaces.

2007-11-26  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Include p4est_file.h in the read_forest example.  This provides
	a function definition for p4est_connectivity_read.

2007-11-26  carsten <carsten@ices.utexas.edu>

	* : Hopefully fixed setting of Morton ordering and level 0
	quadrants. Added perl regex on p4est.h to get rid of p4est_config.h
	on install.

2007-11-25  carsten <carsten@ices.utexas.edu>

	* : A few minor edits.

2007-11-25  carsten <carsten@ices.utexas.edu>

	* : Made quadrant_init a public function in algorithms.

2007-11-24  carsten <carsten@ices.utexas.edu>

	* : Added two morton ordering helper functions in p4est_algorithms.
	Initializing first and last quadrant on each local tree.

2007-11-24  carsten <carsten@ices.utexas.edu>

	* : Computing initial tree and quadrant numbers.

2007-11-24  carsten <carsten@ices.utexas.edu>

	* : Added some files into EXTRA_DIST.

2007-11-24  carsten <carsten@ices.utexas.edu>

	* : Proper error message in obstack_free. Removed mempool_grow1.

2007-11-24  carsten <carsten@ices.utexas.edu>

	* : Implemented memory pool for equal size objects.

2007-11-24  carsten <carsten@ices.utexas.edu>

	* : Added checking memory allocation routines.

2007-11-24  carsten <carsten@ices.utexas.edu>

	* : Wrote array allocator and put it into usage.

2007-11-23  Lucas C Wilcox <lucasw@ices.utexas.edu>

	Merge branch 'master' of
	ssh://lucasw@dom.ices.utexas.edu/common/ccgo/repos/p4est

2007-11-23  carsten <carsten@ices.utexas.edu>

	Resolved conflict on example/simple/simple.c. nothing added to
	commit but untracked files present (use "git add" to track)

2007-11-23  carsten <carsten@ices.utexas.edu>

	* : Hacked the mpi includes so it runs with or without.

2007-11-23  Lucas C Wilcox <lucasw@ices.utexas.edu>

	Merge branch 'master' of
	ssh://lucasw@dom.ices.utexas.edu/common/ccgo/repos/p4est

2007-11-23  carsten <carsten@ices.utexas.edu>

	* : Hacked the mpi includes so it runs with or without.

2007-11-23  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add a stub to read in the mesh file.

2007-11-23  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Remove reference to gettext.

2007-11-23  carsten <carsten@ices.utexas.edu>

	* : Removed mpif77 dependency. Should compile without mpi.

2007-11-23  carsten <carsten@ices.utexas.edu>

	* : Started work on p4est_new.

2007-11-23  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add stdio.h to the headers used by p4est.

2007-11-23  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add the connectivity allocation routines.

2007-11-23  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add some connectivity information.

2007-11-23  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Define p4est malloc macros.

2007-11-23  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Make p4estindent find gnuindent first.

2007-11-23  carsten <carsten@ices.utexas.edu>

	* : Removed the memory handler prototypes.

2007-11-23  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Allow the code to compile on the mac.

2007-11-23  carsten <carsten@ices.utexas.edu>

	* : First shot at connectivity and forest structure.

2007-11-23  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Fix the location of the vertices.

2007-11-23  Lucas C Wilcox <lucasw@ices.utexas.edu>

	Merge branch 'master' of
	ssh://lucasw@dom.ices.utexas.edu/common/ccgo/repos/p4est

2007-11-23  Lucas C Wilcox <lucasw@ices.utexas.edu>

	* : Add the initial forest file description.

2007-11-23  carsten <carsten@ices.utexas.edu>

	* : Compiling in the obstack now.

2007-11-23  carsten <carsten@ices.utexas.edu>

	* : Add obstack files from the GNU C library 2.7.

2007-11-23  carsten <carsten@ices.utexas.edu>

	* : Adding more basic files.

2007-11-23  carsten <carsten@ices.utexas.edu>

	* : Added a bunch of initial files.

