* using log directory '/home/kingaa/projects/Rpkg/pomp/revdep/circumstance.Rcheck'
* using R version 4.2.2 (2022-10-31)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option '--as-cran'
* checking for file 'circumstance/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'circumstance' version '0.0.2.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... NOTE
Suggests orphaned package: 'doRNG'
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package 'circumstance' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... NOTE
Package in Depends field not imported from: ‘parallel’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... ERROR
Running examples in 'circumstance-Ex.R' failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: pfilter
> ### Title: Parallel particle filter computations
> ### Aliases: pfilter pfilter,ANY,numeric-method pfilter-ANY,numeric
> ###   pfilter,ANY,missing-method pfilter-ANY,missing
> ###   pfilter,pompList,numeric-method pfilter-pompList,numeric
> ###   pfilter,pompList,missing-method pfilter-pompList,missing
> 
> ### ** Examples
> 
> library(circumstance)
> 
> ou2() -> ou2
> ou2 %>% pfilter(Np=1000,Nrep=6) -> pfs
Error in ou2 %>% pfilter(Np = 1000, Nrep = 6) : 
  could not find function "%>%"
Execution halted
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
47,53c47,53
<   .id time    y1    y2     x1    x2   ess cond.logLik
< 1   1    1 -4.05 4.781 -3.718  4.25 160.6       -4.31
< 2   1    2  1.83 6.273  0.940  6.84 148.1       -4.42
< 3   1    3 -1.32 7.556 -0.373  7.59  71.4       -5.20
< 4   1    4  6.64 5.730  5.809  6.49  76.1       -5.01
< 5   1    5  6.58 1.561  5.605  1.84 217.1       -3.99
< 6   1    6  7.54 0.176  7.355 -1.57 135.8       -4.51
---
>   time    y1    y2     x1    x2   ess cond.logLik .id
> 1    1 -4.05 4.781 -3.718  4.25 160.6       -4.31   1
> 2    2  1.83 6.273  0.940  6.84 148.1       -4.42   1
> 3    3 -1.32 7.556 -0.373  7.59  71.4       -5.20   1
> 4    4  6.64 5.730  5.809  6.49  76.1       -5.01   1
> 5    5  6.58 1.561  5.605  1.84 217.1       -3.99   1
> 6    6  7.54 0.176  7.355 -1.57 135.8       -4.51   1
 OK
* checking PDF version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 ERROR, 2 NOTEs
